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    FIB fibrillin [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825714, updated on 18-Sep-2024

    Summary

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    Official Symbol
    FIB
    Official Full Name
    fibrillin
    Primary source
    TAIR:AT4G04020
    Locus tag
    AT4G04020
    See related
    Araport:AT4G04020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    FIB1a; fibrillin; fibrillin 1a; PGL35; plastoglobulin 35; T24H24.16; T24H24_16
    Summary
    Fibrillin precursor protein. The fibrillin preprotein, but not the mature protein interacts with ABI2. Regulated by abscisic acid response regulators. Involved in abscisic acid-mediated photoprotection.
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    Genomic context

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    See FIB in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (1931883..1933950)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene transcription repressor Neighboring gene transcription repressor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The ABCs of time management. Wiley L. Nursing, 1978 Sep. PMID 249371
    2. Arabidopsis fibrillin 1-2 subfamily members exert their functions via specific protein-protein interactions. Torres-Romero D, et al. J Exp Bot, 2022 Jan 27. PMID 34651644, Free PMC Article
    3. Fibrillin2 in chloroplast plastoglobules participates in photoprotection and jasmonate-induced senescence. Kim I, et al. Plant Physiol, 2022 Jun 27. PMID 35404409, Free PMC Article
    4. Plant lipid-associated fibrillin proteins condition jasmonate production under photosynthetic stress. Youssef A, et al. Plant J, 2010 Feb 1. PMID 19906042
    5. Fibrillin expression is regulated by abscisic acid response regulators and is involved in abscisic acid-mediated photoprotection. Yang Y, et al. Proc Natl Acad Sci U S A, 2006 Apr 11. PMID 16571665, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_116640.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within photoinhibition IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within photoprotection IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within response to abscisic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to cold IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast stroma HDA PubMed 
    located_in chloroplast thylakoid HDA PubMed 
    located_in chloroplast thylakoid membrane HDA PubMed 
    located_in cytosol HDA PubMed 
    located_in nucleus HDA PubMed 
    located_in plastid IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plastoglobule HDA PubMed 
    located_in stromule IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in thylakoid HDA PubMed 
    located_in thylakoid lumen HDA PubMed 

    General protein information

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    Preferred Names
    fibrillin
    NP_192311.1
    • fibrillin (FIB); FUNCTIONS IN: structural molecule activity; INVOLVED IN: photoinhibition, response to cold, response to abscisic acid stimulus; LOCATED IN: in 8 components; EXPRESSED IN: fruit, guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: Plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT4G22240.1); Has 435 Blast hits to 434 proteins in 78 species: Archae - 0; Bacteria - 75; Metazoa - 0; Fungi - 0; Plants - 340; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      1931883..1933950
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116640.5 → NP_192311.1  fibrillin [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192311.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O81439
      UniProtKB/TrEMBL
      A0A178V0C8, A0A654FLZ8
      Conserved Domains (1) summary
      pfam04755
      Location:92 → 309
      PAP_fibrillin
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O81439.1

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