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    MYB94 myb domain protein 94 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 823914, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MYB94
    Official Full Name
    myb domain protein 94
    Primary source
    TAIR:AT3G47600
    Locus tag
    AT3G47600
    See related
    Araport:AT3G47600
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATMYB94; ATMYBCP70; myb domain protein 94
    Summary
    Encodes a putative transcription factor (MYB94).
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    Genomic context

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    See MYB94 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (17539289..17541307, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene ncRNA Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene transcription regulator/ zinc ion binding protein Neighboring gene TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cuticular wax biosynthesis is up-regulated by the MYB94 transcription factor in Arabidopsis. Lee SB, et al. Plant Cell Physiol, 2015 Jan. PMID 25305760
    2. MYB94 and MYB96 Additively Activate Cuticular Wax Biosynthesis in Arabidopsis. Lee SB, et al. Plant Cell Physiol, 2016 Nov. PMID 27577115
    3. MYB94 and MYB96 additively inhibit callus formation via directly repressing LBD29 expression in Arabidopsis thaliana. Dai X, et al. Plant Sci, 2020 Apr. PMID 32081254
    4. An Arabidopsis gene regulatory network for secondary cell wall synthesis. Taylor-Teeples M, et al. Nature, 2015 Jan 29. PMID 25533953, Free PMC Article
    5. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. MYB94 and MYB96 additively inhibit callus formation via directly repressing LBD29 expression in Arabidopsis thaliana.
      Title: MYB94 and MYB96 additively inhibit callus formation via directly repressing LBD29 expression in Arabidopsis thaliana.
    2. The data collectively indicate that MYB94 and MYB96 exert an additive effect on cuticular wax biosynthesis, which may represent an efficient adaptive mechanism of response to drought in plants.
      Title: MYB94 and MYB96 Additively Activate Cuticular Wax Biosynthesis in Arabidopsis.
    3. R2R3-type MYB94 transcription factor activates Arabidopsis cuticular wax biosynthesis and might be important in plant response to environmental stress, including drought.
      Title: Cuticular wax biosynthesis is up-regulated by the MYB94 transcription factor in Arabidopsis.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001339319.1
    NM_114628.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables sequence-specific DNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables transcription cis-regulatory region binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of DNA-templated transcription IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in positive regulation of wax biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within regulation of DNA-templated transcription TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in response to water deprivation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    myb domain protein 94
    NP_190344.1
    • myb domain protein 94 (MYB94); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 96 (TAIR:AT5G62470.2); Has 8929 Blast hits to 8284 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 491; Plants - 5808; Viruses - 4; Other Eukaryotes - 1790 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      17539289..17541307 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114628.4 → NP_190344.1  myb domain protein 94 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190344.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SN78, Q9ZTC1
      UniProtKB/TrEMBL
      A0A178VGF5, A0A5S9XIZ5, A0A654FF11
      Conserved Domains (1) summary
      PLN03212
      Location:5 → 116
      PLN03212; Transcription repressor MYB5; Provisional

    2. NM_001339319.1 → NP_001325642.1  myb domain protein 94 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VGF5, A0A1I9LLV4, A0A5S9XIZ5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SN78.1

    Gene LinkOut

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