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    OPRD1 opioid receptor delta 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 781956, updated on 4-Oct-2024

    Summary

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    Official Symbol
    OPRD1provided by VGNC
    Official Full Name
    opioid receptor delta 1provided by VGNC
    Primary source
    VGNC:VGNC:50539
    See related
    BGD:BT11141; Ensembl:ENSBTAG00000003202
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See OPRD1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 2 NC_037329.1 (124631202..124671180, complement)

    Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene serine and arginine rich splicing factor 4 Neighboring gene transmembrane protein 200B Neighboring gene erythrocyte membrane protein band 4.1 Neighboring gene YTH N6-methyladenosine RNA binding protein F2 Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037329.1 Chromosome 2 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A highly conserved δ-opioid receptor region determines RGS4 interaction. Karoussiotis C, et al. FEBS J, 2020 Feb. PMID 31386272
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. A highly conserved delta-opioid receptor region determines RGS4 interaction.
      Title: A highly conserved δ-opioid receptor region determines RGS4 interaction.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G protein-coupled enkephalin receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables neuropeptide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled opioid receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuropeptide signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    delta-type opioid receptor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001191148.1 → NP_001178077.1  delta-type opioid receptor

      Status: VALIDATED

      Source sequence(s)
      NKLS02000002
      UniProtKB/TrEMBL
      F1N083
      Related
      ENSBTAP00000004157.6, ENSBTAT00000004157.7
      Conserved Domains (2) summary
      pfam00001
      Location:66 → 318
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl21561
      Location:59 → 232
      7tm_4; Olfactory receptor

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037329.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      124631202..124671180 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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