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    TRG-GCC3-1 tRNA-Gly (anticodon GCC) 3-1 [ Homo sapiens (human) ]

    Gene ID: 7198, updated on 17-Sep-2024

    Summary

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    Official Symbol
    TRG-GCC3-1provided by HGNC
    Official Full Name
    tRNA-Gly (anticodon GCC) 3-1provided by HGNC
    Primary source
    HGNC:HGNC:12282
    See related
    AllianceGenome:HGNC:12282
    Gene type
    tRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    TRG5; TRGL1; TRNAG5
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    Genomic context

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    See TRG-GCC3-1 in Genome Data Viewer
    Location:
    16q22.1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (70778211..70778281, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (76589383..76589453, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (70812114..70812184, complement)

    Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene MTSS I-BAR domain containing 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:70721484-70721990 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:70726089-70726916 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:70726917-70727742 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:70727743-70728568 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:70728569-70729394 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:70729395-70730221 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:70731048-70731874 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:70731875-70732699 Neighboring gene VAC14 component of PIKFYVE complex Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:70736831-70737596 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:70737597-70738364 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:70738365-70739130 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:70739131-70739896 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:70748263-70748982 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:70750423-70751140 Neighboring gene Sharpr-MPRA regulatory region 12359 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11068 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:70771856-70772386 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:70774210-70775017 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:70779970-70780470 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:70780471-70780971 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:70781216-70781850 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:70784627-70785306 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:70788515-70789155 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:70789156-70789796 Neighboring gene VAC14 antisense RNA 1 Neighboring gene tRNA-Gly (anticodon GCC) 2-4 Neighboring gene tRNA-Gly (anticodon GCC) 2-5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Nucleotide sequence and transcription of a human glycine tRNAGCC gene and nearby pseudogene. Pirtle IL, et al. Gene, 1986. PMID 3019833
    2. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Markers

    Other Names

    • tRNA glycine (GCC)-like 1
    • tRNA glycine 5 (anticodon GCC)
    • tRNA-Gly (GCC) 3-1
    • transfer RNA glycine 5 (anticodon GCC)
    • transfer RNA-Gly (GCC) 3-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

      Range
      70778211..70778281 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060940.1 Alternate T2T-CHM13v2.0

      Range
      76589383..76589453 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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