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    SYF2 SYF2 pre-mRNA splicing factor [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 719564, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SYF2provided by VGNC
    Official Full Name
    SYF2 pre-mRNA splicing factorprovided by VGNC
    Primary source
    VGNC:VGNC:78174
    See related
    Ensembl:ENSMMUG00000002968
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SYF2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (199508471..199519286)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (24051662..24062406, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene transmembrane protein 50A Neighboring gene arginine and serine rich protein 1 Neighboring gene interferon-induced transmembrane protein 3 Neighboring gene uncharacterized LOC114673726

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    part_of Prp19 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of catalytic step 2 spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of post-mRNA release spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pre-mRNA-splicing factor SYF2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      199508471..199519286
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015131428.2 → XP_014986914.2  pre-mRNA-splicing factor SYF2

      UniProtKB/TrEMBL
      F7GXY6, G7MHP3
      Related
      ENSMMUP00000003967.4, ENSMMUT00000004205.4
      Conserved Domains (1) summary
      pfam08231
      Location:92 → 238
      SYF2; SYF2 splicing factor
    Nucleotide Protein
    Heading Accession and Version

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