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    CRY1 cryptochrome circadian regulator 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703752, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CRY1provided by VGNC
    Official Full Name
    cryptochrome circadian regulator 1provided by VGNC
    Primary source
    VGNC:VGNC:71499
    Locus tag
    EGK_04148
    See related
    Ensembl:ENSMMUG00000021808
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CRY1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (106673985..106780347, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (106878636..106987330, complement)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene basic proline-rich protein-like Neighboring gene transmembrane protein 263 Neighboring gene mitochondrial transcription termination factor 2 Neighboring gene 40S ribosomal protein SA-like Neighboring gene protein SET-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables FAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in circadian regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in entrainment of circadian clock by photoperiod IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cryptochrome-1
    Names
    cryptochrome 1 (photolyase-like)
    cryptochrome circadian clock 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194159.2 → NP_001181088.1  cryptochrome-1

      See identical proteins and their annotated locations for NP_001181088.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000060
      UniProtKB/TrEMBL
      A0A8J8Y596, F7ENG9, G7N5D7
      Related
      ENSMMUP00000068639.1, ENSMMUT00000105880.1
      Conserved Domains (2) summary
      COG0415
      Location:6 → 491
      PhrB; Deoxyribodipyrimidine photolyase [Replication, recombination and repair]
      pfam03441
      Location:288 → 486
      FAD_binding_7; FAD binding domain of DNA photolyase

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      106673985..106780347 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015152645.2 → XP_015008131.1  cryptochrome-1 isoform X1

      UniProtKB/TrEMBL
      A0A8J8Y596, F7ENG9, G7N5D7
      Related
      ENSMMUP00000073339.1, ENSMMUT00000091737.1
      Conserved Domains (2) summary
      COG0415
      Location:6 → 491
      PhrB; Deoxyribodipyrimidine photolyase [Replication, recombination and repair]
      pfam03441
      Location:288 → 486
      FAD_binding_7; FAD binding domain of DNA photolyase
    Nucleotide Protein
    Heading Accession and Version

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