U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Spaca4 sperm acrosome associated 4 [ Mus musculus (house mouse) ]

    Gene ID: 69363, updated on 14-Nov-2024

    Summary

    Official Symbol
    Spaca4provided by MGI
    Official Full Name
    sperm acrosome associated 4provided by MGI
    Primary source
    MGI:MGI:1916613
    See related
    Ensembl:ENSMUSG00000070563 AllianceGenome:MGI:1916613
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Samp14; 1700008E09Rik
    Summary
    Predicted to be involved in sperm-egg recognition. Predicted to be located in acrosomal vesicle; plasma membrane; and side of membrane. Predicted to be active in membrane. Orthologous to human SPACA4 (sperm acrosome associated 4). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Spaca4 in Genome Data Viewer
    Location:
    7 B3; 7 29.46 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (45374531..45375240, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (45725107..45725816, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene D site albumin promoter binding protein Neighboring gene STARR-positive B cell enhancer ABC_E6545 Neighboring gene sphingosine kinase 2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:52973256-52973443 Neighboring gene ribosomal protein L18 Neighboring gene family with sequence similarity 83, member E Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:52988906-52989102 Neighboring gene sulfotransferase family, cytosolic, 2B, member 1 Neighboring gene predicted gene, 31597 Neighboring gene STARR-seq mESC enhancer starr_18855 Neighboring gene predicted gene, 39009

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in binding of sperm to zona pellucida IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cell adhesion IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in fertilization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in sperm-egg recognition IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in inner acrosomal membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in outer acrosomal membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in side of membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    sperm acrosome membrane-associated protein 4
    Names
    sperm acrosomal membrane 14

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_027055.3NP_081331.2  sperm acrosome membrane-associated protein 4 precursor

      See identical proteins and their annotated locations for NP_081331.2

      Status: VALIDATED

      Source sequence(s)
      AC167242
      Consensus CDS
      CCDS21262.1
      UniProtKB/Swiss-Prot
      Q80ZQ0, Q9DAK7
      Related
      ENSMUSP00000091991.4, ENSMUST00000094424.7

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      45374531..45375240 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)