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    Fbxo36 F-box protein 36 [ Mus musculus (house mouse) ]

    Gene ID: 66153, updated on 2-Nov-2024

    Summary

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    Official Symbol
    Fbxo36provided by MGI
    Official Full Name
    F-box protein 36provided by MGI
    Primary source
    MGI:MGI:1289192
    See related
    Ensembl:ENSMUSG00000073633 AllianceGenome:MGI:1289192
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    D1Ertd757e; 0610008D19Rik; 1110020F21Rik; 2410002G19Rik
    Summary
    Orthologous to human FBXO36 (F-box protein 36). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in testis adult (RPKM 36.3), kidney adult (RPKM 5.2) and 5 other tissues See more
    Orthologs
    human all
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    Genomic context

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    See Fbxo36 in Genome Data Viewer
    Location:
    1 C5; 1 43.43 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (84817562..84878208)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (84839841..84900487)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene delta/notch-like EGF repeat containing Neighboring gene STARR-seq mESC enhancer starr_01515 Neighboring gene predicted gene, 57795 Neighboring gene microRNA 5126 Neighboring gene predicted gene, 51637 Neighboring gene thyroid hormone receptor interactor 12 Neighboring gene STARR-seq mESC enhancer starr_01519 Neighboring gene STARR-seq mESC enhancer starr_01525 Neighboring gene STARR-seq mESC enhancer starr_01531 Neighboring gene solute carrier family 16 (monocarboxylic acid transporters), member 14 Neighboring gene predicted gene, 39669 Neighboring gene predicted pseudogene 15433

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Systematic analysis and nomenclature of mammalian F-box proteins. Jin J, et al. Genes Dev, 2004 Nov 1. PMID 15520277, Free PMC Article
    2. Database resources of the National Center for Biotechnology Information. Wheeler DL, et al. Nucleic Acids Res, 2001 Jan 1. PMID 11125038, Free PMC Article
    3. High-throughput discovery of novel developmental phenotypes. Dickinson ME, et al. Nature, 2016 Sep 22. PMID 27626380, Free PMC Article
    4. EUCOMM--the European conditional mouse mutagenesis program. Friedel RH, et al. Brief Funct Genomic Proteomic, 2007 Sep. PMID 17967808
    5. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, et al. Development, 2000 Apr. PMID 10725249

    See all (19) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Variation

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    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (1) 

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    F-box only protein 36

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025386.3 → NP_079662.1  F-box only protein 36

      See identical proteins and their annotated locations for NP_079662.1

      Status: VALIDATED

      Source sequence(s)
      AU019733, BC049581, BY096703, BY708252
      Consensus CDS
      CCDS35634.1
      UniProtKB/Swiss-Prot
      Q9CQ24
      Related
      ENSMUSP00000095276.4, ENSMUST00000097672.4
      Conserved Domains (1) summary
      pfam12937
      Location:94 → 140
      F-box-like; F-box-like

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      84817562..84878208
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006496520.3 → XP_006496583.1  F-box only protein 36 isoform X1

      Conserved Domains (1) summary
      pfam12937
      Location:73 → 117
      F-box-like
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9CQ24.1 GenPept UniProtKB/Swiss-Prot:Q9CQ24

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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