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    uncharacterized protein [ Chlamydomonas reinhardtii ]

    Gene ID: 5716506, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    Phytozome:Cre12.g507650
    Locus tag
    CHLRE_12g507650v5
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Chlamydomonas reinhardtii (strain: CC-503 cw92 mt+)
    Lineage
    Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; CS clade; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
    Old locus tag
    CHLREDRAFT_55286
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    Genomic context

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    Location:
    chromosome: 12
    Exon count:
    7
    Sequence:
    Chromosome: 12; NC_057015.1 (2316223..2321002, complement)

    Chromosome 12 - NC_057015.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_057015.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The chloroplast DnaJ homolog CDJ1 of Chlamydomonas reinhardtii is part of a multichaperone complex containing HSP70B, CGE1, and HSP90C. Willmund F, et al. Plant Physiol, 2008 Dec. PMID 18931144, Free PMC Article
    2. In vitro characterization of bacterial and chloroplast Hsp70 systems reveals an evolutionary optimization of the co-chaperones for their Hsp70 partner. Veyel D, et al. Biochem J, 2014 May 15. PMID 24564700
    3. The Chlamydomonas genome reveals the evolution of key animal and plant functions. Merchant SS, et al. Science, 2007 Oct 12. PMID 17932292, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Chloroplast HSP70B's ATPase, folding-assistance and holdase activities are regulated by CDJ1 and CGE1 co-chaperones at various temperatures.
      Title: In vitro characterization of bacterial and chloroplast Hsp70 systems reveals an evolutionary optimization of the co-chaperones for their Hsp70 partner.
    2. CDJ1 forms common complexes with plastidic HSP90C, HSP70B, and CGE1.
      Title: The chloroplast DnaJ homolog CDJ1 of Chlamydomonas reinhardtii is part of a multichaperone complex containing HSP70B, CGE1, and HSP90C.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables heat shock protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables unfolded protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chaperone cofactor-dependent protein refolding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein refolding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to heat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_057015.1 Reference assembly

      Range
      2316223..2321002 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043068190.1 → XP_042918177.1  uncharacterized protein CHLRE_12g507650v5 [Chlamydomonas reinhardtii]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q66YD3
      Conserved Domains (1) summary
      PRK14293
      Location:47 → 409
      PRK14293; molecular chaperone DnaJ

    2. XM_001690788.2 → XP_001690840.1  uncharacterized protein CHLRE_12g507650v5 [Chlamydomonas reinhardtii]

      See identical proteins and their annotated locations for XP_001690840.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q66YD3
      Conserved Domains (1) summary
      PRK14293
      Location:47 → 409
      PRK14293; molecular chaperone DnaJ
    Nucleotide Protein
    Heading Accession and Version

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