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    Rgs17 regulator of G-protein signaling 17 [ Mus musculus (house mouse) ]

    Gene ID: 56533, updated on 28-Oct-2024

    Summary

    Official Symbol
    Rgs17provided by MGI
    Official Full Name
    regulator of G-protein signaling 17provided by MGI
    Primary source
    MGI:MGI:1927469
    See related
    Ensembl:ENSMUSG00000019775 AllianceGenome:MGI:1927469
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Rgsz2; 6430507P11Rik
    Summary
    Predicted to enable GTPase activator activity. Predicted to be involved in negative regulation of signal transduction. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in several cellular components, including neuron projection; nucleus; and synapse. Orthologous to human RGS17 (regulator of G protein signaling 17). [provided by Alliance of Genome Resources, Oct 2024]
    Expression
    Biased expression in CNS E18 (RPKM 5.0), frontal lobe adult (RPKM 4.8) and 8 other tissues See more
    Orthologs
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    Genomic context

    See Rgs17 in Genome Data Viewer
    Location:
    10 A1; 10 1.91 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (5775663..5872413, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (5825663..5922412, complement)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_25595 Neighboring gene STARR-positive B cell enhancer ABC_E3873 Neighboring gene STARR-positive B cell enhancer ABC_E3872 Neighboring gene predicted gene, 53609 Neighboring gene STARR-seq mESC enhancer starr_25593 Neighboring gene mitochondrial translational release factor 1-like Neighboring gene F-box protein 5 Neighboring gene predicted gene, 18902 Neighboring gene STARR-seq mESC enhancer starr_25590 Neighboring gene STARR-seq mESC enhancer starr_25589 Neighboring gene STARR-seq mESC enhancer starr_25588 Neighboring gene STARR-seq mESC enhancer starr_25586 Neighboring gene STARR-seq mESC enhancer starr_25585 Neighboring gene STARR-seq mESC enhancer starr_25584 Neighboring gene predicted gene 3213 Neighboring gene tripartite motif-containing 59 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables GTPase activator activity TAS
    Traceable Author Statement
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    regulator of G-protein signaling 17
    Names
    regulator of G-protein signaling Z2
    regulator of Gz-selective protein signaling 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001161822.1NP_001155294.1  regulator of G-protein signaling 17 isoform 1

      See identical proteins and their annotated locations for NP_001155294.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
      Source sequence(s)
      AC159325, AK030492, AK045770
      Consensus CDS
      CCDS56686.1
      UniProtKB/TrEMBL
      G5E8E0, Q8BR34
      Related
      ENSMUSP00000065825.8, ENSMUST00000064225.14
      Conserved Domains (1) summary
      cl02565
      Location:61217
      RGS; Regulator of G protein signaling (RGS) domain superfamily
    2. NM_019958.4NP_064342.1  regulator of G-protein signaling 17 isoform 2

      See identical proteins and their annotated locations for NP_064342.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) lacks the exon containing the translation start codon compared to variant 1. The resulting isoform (2) is shorter at the N-terminus compared to isoform 1.
      Source sequence(s)
      AC159325, AK030492
      Consensus CDS
      CCDS56685.1
      UniProtKB/Swiss-Prot
      Q543T9, Q9QZB0
      UniProtKB/TrEMBL
      Q8C5F3
      Related
      ENSMUSP00000116291.2, ENSMUST00000131996.8
      Conserved Domains (1) summary
      cl02565
      Location:41197
      RGS; Regulator of G protein signaling (RGS) domain superfamily

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      5775663..5872413 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006512457.5XP_006512520.1  regulator of G-protein signaling 17 isoform X2

      See identical proteins and their annotated locations for XP_006512520.1

      UniProtKB/Swiss-Prot
      Q543T9, Q9QZB0
      UniProtKB/TrEMBL
      Q8C5F3
      Conserved Domains (1) summary
      cl02565
      Location:41197
      RGS; Regulator of G protein signaling (RGS) domain superfamily
    2. XM_030245185.2XP_030101045.1  regulator of G-protein signaling 17 isoform X1

      UniProtKB/TrEMBL
      G5E8E0, Q8BR34
      Conserved Domains (1) summary
      cl02565
      Location:61217
      RGS; Regulator of G protein signaling (RGS) domain superfamily