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    cdk2ap1 cyclin-dependent kinase 2 associated protein 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 549484, updated on 4-Nov-2024

    Summary

    Official Symbol
    cdk2ap1provided by Xenbase
    Official Full Name
    cyclin-dependent kinase 2 associated protein 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-5715100
    See related
    Ensembl:ENSXETG00000005817 AllianceGenome:Xenbase:XB-GENE-5715100
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    doc1; st19; doc-1; dorc1; p12doc-1
    Summary
    Predicted to enable kinase activity. Predicted to act upstream of or within phosphorylation. Predicted to be located in nucleus. Orthologous to human CDK2AP1 (cyclin dependent kinase 2 associated protein 1). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See cdk2ap1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (161139306..161146899)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (152517892..152524390)

    Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene lysine methyltransferase 5A Neighboring gene uncharacterized LOC116407493 Neighboring gene strawberry notch homolog 1 Neighboring gene mitochondrial translation release factor in rescue Neighboring gene M-phase phosphoprotein 9

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within phosphorylation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    cyclin-dependent kinase 2-associated protein 1
    Names
    CDK2 (cyclin-dependent kinase 2)-associated protein 1
    CDK2-associated protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001016730.2NP_001016730.1  cyclin-dependent kinase 2-associated protein 1

      See identical proteins and their annotated locations for NP_001016730.1

      Status: PROVISIONAL

      Source sequence(s)
      CR760030
      UniProtKB/TrEMBL
      A0A7D9N0B6, Q28J67
      Related
      ENSXETP00000012795.4, ENSXETT00000012795.5
      Conserved Domains (1) summary
      pfam09806
      Location:50115
      CDK2AP; Cyclin-dependent kinase 2-associated protein

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      161139306..161146899
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)