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    PVX_195290 vivapain-1 [ Plasmodium vivax (malaria parasite P. vivax) ]

    Gene ID: 5471642, updated on 17-May-2024

    Summary

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    Gene symbol
    PVX_195290
    Gene description
    vivapain-1
    Locus tag
    PVX_195290
    See related
    PlasmoDB:PVX_195290; VEuPathDB:PVX_195290
    Gene type
    protein coding
    RNA name
    vivapain-1
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium vivax (strain: Salvador I)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
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    Genomic context

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    See PVX_195290 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_001850071.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_001850071.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton JM, et al. Nature, 2008 Oct 9. PMID 18843361, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis involved in protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vivapain-1
    XP_001612423.1
    • encoded by transcript PVX_195290A

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001850071.1 Reference assembly

      Range
      97..1989
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001612373.1 → XP_001612423.1  vivapain-1 [Plasmodium vivax]

      See identical proteins and their annotated locations for XP_001612423.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0J9T949, A5KDD9
      Conserved Domains (2) summary
      pfam00112
      Location:339 → 582
      Peptidase_C1; Papain family cysteine protease
      pfam08246
      Location:237 → 293
      Inhibitor_I29; Cathepsin propeptide inhibitor domain (I29)
    Nucleotide Protein
    Heading Accession and Version

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