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    LOC542476 ascorbate peroxidase 2 [ Zea mays ]

    Gene ID: 542476, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC542476
    Gene description
    ascorbate peroxidase 2
    Locus tag
    ZEAMMB73_Zm00001d007234
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    apx; apx2; GRMZM2G140667
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    Genomic context

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    See LOC542476 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 2 NC_050097.1 (225310491..225313128, complement)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 2 NC_024460.2 (225337099..225339736, complement)

    Chromosome 2 - NC_050097.1Genomic Context describing neighboring genes Neighboring gene dentin sialophosphoprotein-related Neighboring gene uncharacterized LOC100216608 Neighboring gene two-component response regulator-like PRR37 Neighboring gene uncharacterized LOC103647962 Neighboring gene protein NETWORKED 2A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization. Gardiner J, et al. Plant Physiol, 2004 Apr. PMID 15020742, Free PMC Article
    2. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article
    3. Insights into corn genes derived from large-scale cDNA sequencing. Alexandrov NN, et al. Plant Mol Biol, 2009 Jan. PMID 18937034, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables peroxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to oxidative stress IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in hydrogen peroxide catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to reactive oxygen species IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ascorbate peroxidase 2
    Names
    APx2 - Cytosolic Ascorbate Peroxidase
    APx2-Cytosolic Ascorbate Peroxidase
    IDP162
    IDP3857
    IDP3884
    PCO104002
    PCO104002a
    ascorbate peroxidase2
    cytosolic ascorbate peroxidase
    magi72449
    pMAGI_72449-1243
    pMAGI_72449-1314
    pMAGI_72449-1324
    pMAGI_72449-1392
    pMAGI_72449-1410
    pMAGI_72449-1446
    pMAGI_72449-1915
    pMAGI_72449-1926
    pMAGI_72449-757
    pMAPX1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001112030.2 → NP_001105500.2  ascorbate peroxidase 2

      Status: VALIDATED

      Source sequence(s)
      BT041499, EU974484
      UniProtKB/TrEMBL
      A0A3L6FPP5, A0A8J8Y5K3, B4G031, B6TVL8
      Conserved Domains (1) summary
      cl00196
      Location:1 → 250
      plant_peroxidase_like; Heme-dependent peroxidases similar to plant peroxidases

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050097.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      225310491..225313128 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases
    Research Materials