U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC542154 glossy 1 [ Zea mays ]

    Gene ID: 542154, updated on 14-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC542154
    Gene description
    glossy 1
    Locus tag
    ZEAMMB73_Zm00001d020557
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    gl1; GRMZM2G114642
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC542154 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 7 NC_050102.1 (123686090..123691573)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 7 NC_024465.2 (122229076..122234559)

    Chromosome 7 - NC_050102.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103632787 Neighboring gene WAT1-related protein Neighboring gene WAT1-related protein Neighboring gene transcription factor UPBEAT1 Neighboring gene putative xyloglucan glycosyltransferase 8

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Cloning and characterization of GLOSSY1, a maize gene involved in cuticle membrane and wax production. Sturaro M, et al. Plant Physiol, 2005 May. PMID 15849306, Free PMC Article
    2. The glossy1 locus of maize and an epidermis-specific cDNA from Kleinia odora define a class of receptor-like proteins required for the normal accumulation of cuticular waxes. Hansen JD, et al. Plant Physiol, 1997 Apr. PMID 9112770, Free PMC Article
    3. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lipid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    glossy 1
    Names
    glossy1 protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001111777.1 → NP_001105247.1  glossy 1

      See identical proteins and their annotated locations for NP_001105247.1

      Status: PROVISIONAL

      Source sequence(s)
      AY505017
      UniProtKB/TrEMBL
      A0A1D6I4Q3, A0A3L6E121, Q6RCI6
      Conserved Domains (3) summary
      PLN02869
      Location:5 → 620
      PLN02869; fatty aldehyde decarbonylase
      pfam04116
      Location:140 → 271
      FA_hydroxylase; Fatty acid hydroxylase superfamily
      pfam12076
      Location:450 → 620
      Wax2_C; WAX2 C-terminal domain

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050102.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      123686090..123691573
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials