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    PDZD11 PDZ domain containing 11 [ Bos taurus (domestic cattle) ]

    Gene ID: 515371, updated on 4-Oct-2024

    Summary

    Official Symbol
    PDZD11provided by VGNC
    Official Full Name
    PDZ domain containing 11provided by VGNC
    Primary source
    VGNC:VGNC:32724
    See related
    BGD:BT24629; Ensembl:ENSBTAG00000012860
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    NEW
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    Genomic context

    See PDZD11 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) X NC_037357.1 (80153489..80156421)

    Chromosome X - NC_037357.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101904691 Neighboring gene glycerophosphodiester phosphodiesterase domain containing 2 Neighboring gene kinesin family member 4A Neighboring gene zinc finger protein Pegasus-like Neighboring gene arrestin 3 Neighboring gene pyrimidinergic receptor P2Y4

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037357.1 Chromosome X Reference ARS-UCD2.0 Primary Assembly

    Pathways from PubChem

    General gene information

    Clone Names

    • MGC133775

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in maintenance of epithelial cell apical/basal polarity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in neurotransmitter secretion IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in protein localization to basolateral plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in basolateral plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in cell-cell junction IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    PDZ domain-containing protein 11

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001037603.1NP_001032692.1  PDZ domain-containing protein 11

      See identical proteins and their annotated locations for NP_001032692.1

      Status: PROVISIONAL

      Source sequence(s)
      BC109619
      UniProtKB/Swiss-Prot
      Q32LE7
      Related
      ENSBTAP00000017091.2, ENSBTAT00000017091.4
      Conserved Domains (1) summary
      cd00992
      Location:45125
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037357.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      80153489..80156421
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010821846.4XP_010820148.1  PDZ domain-containing protein 11 isoform X1

      See identical proteins and their annotated locations for XP_010820148.1

      Conserved Domains (1) summary
      cd00992
      Location:45131
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    2. XM_005228011.5XP_005228068.1  PDZ domain-containing protein 11 isoform X2

      See identical proteins and their annotated locations for XP_005228068.1

      UniProtKB/Swiss-Prot
      Q32LE7
      Conserved Domains (1) summary
      cd00992
      Location:45125
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    3. XM_005228010.5XP_005228067.1  PDZ domain-containing protein 11 isoform X1

      See identical proteins and their annotated locations for XP_005228067.1

      Conserved Domains (1) summary
      cd00992
      Location:45131
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...