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    DPEP1 dipeptidase 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 514685, updated on 10-Oct-2024

    Summary

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    Official Symbol
    DPEP1provided by VGNC
    Official Full Name
    dipeptidase 1provided by VGNC
    Primary source
    VGNC:VGNC:49143
    See related
    BGD:BT20944; Ensembl:ENSBTAG00000033326
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See DPEP1 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 18 NC_037345.1 (14525084..14542788)

    Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA MBII-202 Neighboring gene ribosomal protein L13 Neighboring gene copine 7 Neighboring gene charged multivesicular body protein 1A Neighboring gene spermatogenesis associated 33 Neighboring gene uncharacterized LOC104974758 Neighboring gene cyclin dependent kinase 10

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Clone Names

    • MGC126924

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metallodipeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dipeptidase 1
    Names
    beta-lactamase
    dipeptidase 1 (renal)
    microsomal dipeptidase
    NP_001029644.1
    XP_005218631.1
    XP_005218632.1
    XP_005218634.1
    XP_005218637.1
    XP_059732662.1
    XP_059732663.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001034472.2 → NP_001029644.1  dipeptidase 1 precursor

      See identical proteins and their annotated locations for NP_001029644.1

      Status: PROVISIONAL

      Source sequence(s)
      BC102783
      UniProtKB/Swiss-Prot
      Q3SZM7
      Conserved Domains (1) summary
      pfam01244
      Location:25 → 352
      Peptidase_M19; Membrane dipeptidase (Peptidase family M19)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037345.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      14525084..14542788
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059876680.1 → XP_059732663.1  dipeptidase 1 isoform X5

      UniProtKB/TrEMBL
      A0A452DIG4
      Related
      ENSBTAP00000016201.3, ENSBTAT00000016201.4

    2. XM_005218575.2 → XP_005218632.1  dipeptidase 1 isoform X2

      UniProtKB/TrEMBL
      A0A3Q1MH74
      Conserved Domains (1) summary
      pfam01244
      Location:74 → 401
      Peptidase_M19; Membrane dipeptidase (Peptidase family M19)

    3. XM_005218574.5 → XP_005218631.1  dipeptidase 1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1MH74
      Conserved Domains (1) summary
      pfam01244
      Location:92 → 419
      Peptidase_M19; Membrane dipeptidase (Peptidase family M19)

    4. XM_005218580.5 → XP_005218637.1  dipeptidase 1 isoform X6

      See identical proteins and their annotated locations for XP_005218637.1

      UniProtKB/Swiss-Prot
      Q3SZM7
      Conserved Domains (1) summary
      pfam01244
      Location:25 → 352
      Peptidase_M19; Membrane dipeptidase (Peptidase family M19)

    5. XM_005218577.5 → XP_005218634.1  dipeptidase 1 isoform X4

      UniProtKB/TrEMBL
      A0A3Q1MH74, A0AAF7A8I1
      Related
      ENSBTAP00000064830.2, ENSBTAT00000077319.2
      Conserved Domains (1) summary
      pfam01244
      Location:62 → 389
      Peptidase_M19; Membrane dipeptidase (Peptidase family M19)

    6. XM_059876679.1 → XP_059732662.1  dipeptidase 1 isoform X3

      Related
      ENSBTAP00000069989.2, ENSBTAT00000083412.2
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3SZM7.1 GenPept UniProtKB/Swiss-Prot:Q3SZM7

    Gene LinkOut

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