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    DNM1 dynamin 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 508794, updated on 10-Oct-2024

    Summary

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    Official Symbol
    DNM1provided by VGNC
    Official Full Name
    dynamin 1provided by VGNC
    Primary source
    VGNC:VGNC:50145
    See related
    BGD:BT14613; Ensembl:ENSBTAG00000011307
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See DNM1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 11 NC_037338.1 (98822587..98866068)

    Chromosome 11 - NC_037338.1Genomic Context describing neighboring genes Neighboring gene bublin coiled coil protein Neighboring gene CDKN1A interacting zinc finger protein 1 Neighboring gene uncharacterized LOC104973485 Neighboring gene microRNA mir-3604-2 Neighboring gene microRNA mir-199b Neighboring gene microRNA mir-3154 Neighboring gene uncharacterized LOC132346638 Neighboring gene golgin A2 Neighboring gene SWI5 homologous recombination repair protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037338.1 Chromosome 11 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The association of dynamin with synaptophysin regulates quantal size and duration of exocytotic events in chromaffin cells. González-Jamett AM, et al. J Neurosci, 2010 Aug 11. PMID 20702699, Free PMC Article
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Clone Names

    • MGC142803

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dynamin-1
    NP_001070288.1
    XP_005213276.1
    XP_005213277.1
    XP_005213279.1
    XP_005213280.1
    XP_005213281.1
    XP_005213282.1
    XP_005213288.1
    XP_010808706.1
    XP_010808707.1
    XP_010808708.1
    XP_015329102.1
    XP_059747117.1
    XP_059747118.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076820.1 → NP_001070288.1  dynamin-1

      See identical proteins and their annotated locations for NP_001070288.1

      Status: PROVISIONAL

      Source sequence(s)
      BC123778
      UniProtKB/Swiss-Prot
      Q08DF4
      UniProtKB/TrEMBL
      A0AAF6ZBK2
      Related
      ENSBTAP00000032672.4, ENSBTAT00000032743.5
      Conserved Domains (5) summary
      smart00053
      Location:6 → 245
      DYNc; Dynamin, GTPase
      PHA03378
      Location:752 → 845
      PHA03378; EBNA-3B; Provisional
      cd01256
      Location:520 → 629
      PH_dynamin; Dynamin pleckstrin homology (PH) domain
      pfam01031
      Location:216 → 502
      Dynamin_M; Dynamin central region
      pfam02212
      Location:657 → 745
      GED; Dynamin GTPase effector domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037338.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      98822587..98866068
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005213220.5 → XP_005213277.1  dynamin-1 isoform X2

      See identical proteins and their annotated locations for XP_005213277.1

      UniProtKB/TrEMBL
      A0A3Q1MFG5, A0AAF6ZBK2
      Related
      ENSBTAP00000069263.2, ENSBTAT00000068572.2
      Conserved Domains (5) summary
      smart00053
      Location:6 → 245
      DYNc; Dynamin, GTPase
      PHA03247
      Location:751 → 867
      PHA03247; large tegument protein UL36; Provisional
      cd01256
      Location:520 → 629
      PH_dynamin; Dynamin pleckstrin homology (PH) domain
      pfam01031
      Location:216 → 502
      Dynamin_M; Dynamin central region
      pfam02212
      Location:657 → 745
      GED; Dynamin GTPase effector domain

    2. XM_010810404.4 → XP_010808706.1  dynamin-1 isoform X3

      See identical proteins and their annotated locations for XP_010808706.1

      UniProtKB/TrEMBL
      A0AAF6ZBK2
      Conserved Domains (5) summary
      smart00053
      Location:6 → 245
      DYNc; Dynamin, GTPase
      cd01256
      Location:520 → 629
      PH_dynamin; Dynamin pleckstrin homology (PH) domain
      pfam01031
      Location:216 → 502
      Dynamin_M; Dynamin central region
      pfam02212
      Location:657 → 745
      GED; Dynamin GTPase effector domain
      NF033913
      Location:710 → 863
      fibronec_FbpA; LPXTG-anchored fibronectin-binding protein FbpA

    3. XM_005213223.5 → XP_005213280.1  dynamin-1 isoform X5

      See identical proteins and their annotated locations for XP_005213280.1

      UniProtKB/TrEMBL
      A0AAF6ZBK2
      Conserved Domains (5) summary
      smart00053
      Location:6 → 245
      DYNc; Dynamin, GTPase
      PHA03378
      Location:752 → 841
      PHA03378; EBNA-3B; Provisional
      cd01256
      Location:520 → 629
      PH_dynamin; Dynamin pleckstrin homology (PH) domain
      pfam01031
      Location:216 → 502
      Dynamin_M; Dynamin central region
      pfam02212
      Location:657 → 745
      GED; Dynamin GTPase effector domain

    4. XM_005213224.5 → XP_005213281.1  dynamin-1 isoform X6

      UniProtKB/TrEMBL
      A0A3Q1LR08, A0AAF6ZBK2
      Related
      ENSBTAP00000057458.2, ENSBTAT00000068013.2
      Conserved Domains (5) summary
      smart00053
      Location:6 → 245
      DYNc; Dynamin, GTPase
      PHA03247
      Location:747 → 863
      PHA03247; large tegument protein UL36; Provisional
      cd01256
      Location:514 → 625
      PH_dynamin; Dynamin pleckstrin homology (PH) domain
      pfam01031
      Location:216 → 502
      Dynamin_M; Dynamin central region
      pfam02212
      Location:653 → 741
      GED; Dynamin GTPase effector domain

    5. XM_059891135.1 → XP_059747118.1  dynamin-1 isoform X9

      UniProtKB/TrEMBL
      A0A3Q1N4X4

    6. XM_005213219.5 → XP_005213276.1  dynamin-1 isoform X1

      See identical proteins and their annotated locations for XP_005213276.1

      UniProtKB/TrEMBL
      A0AAF6ZBK2
      Conserved Domains (5) summary
      smart00053
      Location:6 → 245
      DYNc; Dynamin, GTPase
      PHA03378
      Location:763 → 864
      PHA03378; EBNA-3B; Provisional
      cd01256
      Location:520 → 629
      PH_dynamin; Dynamin pleckstrin homology (PH) domain
      pfam01031
      Location:216 → 502
      Dynamin_M; Dynamin central region
      pfam02212
      Location:657 → 745
      GED; Dynamin GTPase effector domain

    7. XM_005213222.5 → XP_005213279.1  dynamin-1 isoform X4

      See identical proteins and their annotated locations for XP_005213279.1

      UniProtKB/TrEMBL
      A0AAF6ZBK2
      Conserved Domains (5) summary
      smart00053
      Location:6 → 245
      DYNc; Dynamin, GTPase
      PHA03378
      Location:752 → 841
      PHA03378; EBNA-3B; Provisional
      cd01256
      Location:520 → 629
      PH_dynamin; Dynamin pleckstrin homology (PH) domain
      pfam01031
      Location:216 → 502
      Dynamin_M; Dynamin central region
      pfam02212
      Location:657 → 745
      GED; Dynamin GTPase effector domain

    8. XM_059891134.1 → XP_059747117.1  dynamin-1 isoform X8

    9. XM_010810405.3 → XP_010808707.1  dynamin-1 isoform X7

      UniProtKB/TrEMBL
      A0AAF6ZBK2
      Conserved Domains (5) summary
      smart00053
      Location:6 → 245
      DYNc; Dynamin, GTPase
      PHA03378
      Location:759 → 860
      PHA03378; EBNA-3B; Provisional
      cd01256
      Location:514 → 625
      PH_dynamin; Dynamin pleckstrin homology (PH) domain
      pfam01031
      Location:216 → 502
      Dynamin_M; Dynamin central region
      pfam02212
      Location:653 → 741
      GED; Dynamin GTPase effector domain

    10. XM_015473616.3 → XP_015329102.1  dynamin-1 isoform X9

      UniProtKB/TrEMBL
      A0A3Q1N4X4, A0AAF6ZBK2
      Related
      ENSBTAP00000064942.1, ENSBTAT00000073787.2
      Conserved Domains (5) summary
      smart00053
      Location:6 → 245
      DYNc; Dynamin, GTPase
      PHA03378
      Location:752 → 844
      PHA03378; EBNA-3B; Provisional
      cd01256
      Location:520 → 629
      PH_dynamin; Dynamin pleckstrin homology (PH) domain
      pfam01031
      Location:216 → 502
      Dynamin_M; Dynamin central region
      pfam02212
      Location:657 → 745
      GED; Dynamin GTPase effector domain

    11. XM_010810406.4 → XP_010808708.1  dynamin-1 isoform X10

      See identical proteins and their annotated locations for XP_010808708.1

      UniProtKB/TrEMBL
      A0AAF6ZBK2
      Conserved Domains (5) summary
      smart00053
      Location:6 → 245
      DYNc; Dynamin, GTPase
      PHA03378
      Location:752 → 844
      PHA03378; EBNA-3B; Provisional
      cd01256
      Location:520 → 629
      PH_dynamin; Dynamin pleckstrin homology (PH) domain
      pfam01031
      Location:216 → 502
      Dynamin_M; Dynamin central region
      pfam02212
      Location:657 → 745
      GED; Dynamin GTPase effector domain

    12. XM_005213225.5 → XP_005213282.1  dynamin-1 isoform X9

      See identical proteins and their annotated locations for XP_005213282.1

      UniProtKB/TrEMBL
      A0A3Q1N4X4, A0AAF6ZBK2
      Conserved Domains (5) summary
      smart00053
      Location:6 → 245
      DYNc; Dynamin, GTPase
      PHA03378
      Location:752 → 844
      PHA03378; EBNA-3B; Provisional
      cd01256
      Location:520 → 629
      PH_dynamin; Dynamin pleckstrin homology (PH) domain
      pfam01031
      Location:216 → 502
      Dynamin_M; Dynamin central region
      pfam02212
      Location:657 → 745
      GED; Dynamin GTPase effector domain

    13. XM_005213231.5 → XP_005213288.1  dynamin-1 isoform X11

      UniProtKB/TrEMBL
      A0AAF6ZBK2
      Conserved Domains (5) summary
      smart00053
      Location:6 → 245
      DYNc; Dynamin, GTPase
      cd01256
      Location:514 → 625
      PH_dynamin; Dynamin pleckstrin homology (PH) domain
      pfam01031
      Location:216 → 501
      Dynamin_M; Dynamin central region
      pfam02212
      Location:653 → 741
      GED; Dynamin GTPase effector domain
      cl27975
      Location:748 → 847
      EBV-NA3; Epstein-Barr virus nuclear antigen 3 (EBNA-3)

    RNA

    1. XR_009496278.1 RNA Sequence

    2. XR_003037043.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q08DF4.1 GenPept UniProtKB/Swiss-Prot:Q08DF4

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