LAMP1 lysosomal associated membrane protein 1 [Sus scrofa (pig)] - Gene

Summary

Official Symbol: LAMP1provided by VGNC
Official Full Name: lysosomal associated membrane protein 1provided by VGNC
Primary source: VGNC:VGNC:89627
See related: Ensembl:ENSSSCG00000009555
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Sus scrofa
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Also known as: LAMP-1
Expression: Ubiquitous expression in kidney (RPKM 202.3), lung (RPKM 186.6) and 8 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 11

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
106	current	Sscrofa11.1 (GCF_000003025.6)	11	NC_010453.5 (78600818..78617587)
105	previous assembly	Sscrofa10.2 (GCF_000003025.5)	11	NC_010453.4 (86117963..86134737, complement)

Chromosome 11 - NC_010453.5 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
BioProject: PRJNA311523
Publication: PMID 27646534
Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

A study of the expression of BECN1, LC3-II, and LAMP1 throughout the luteal phase of the estrous cycle in order to assess autophagy during corpus luteum development is reported.
Title: The expression of autophagy-related proteins within the corpus luteum lifespan in pigs.

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General gene information

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Gene Ontology Provided by RefSeq

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: lysosome-associated membrane glycoprotein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.