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    GLT6D1 glycosyltransferase 6 domain containing 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 491262, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GLT6D1provided by VGNC
    Official Full Name
    glycosyltransferase 6 domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:41279
    See related
    Ensembl:ENSCAFG00845009120
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See GLT6D1 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (50518005..50527238)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (48891252..48902129)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (49640783..49650006)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (49297953..49307173)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (49592455..49604170)

    Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene minor allergen Can f 2 Neighboring gene lipocalin 9 Neighboring gene minor allergen Can f 2 Neighboring gene beta-lactoglobulin-2-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hexosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in lipid glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glycosyltransferase 6 domain-containing protein 1; putative glycosyltransferase 6 domain-containing protein 1
    XP_013972426.2
    XP_038342898.1
    XP_038404742.1
    XP_038468693.1
    XP_038533989.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051813.1 Reference ROS_Cfam_1.0

      Range
      50518005..50527238
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038678061.1 → XP_038533989.1  putative glycosyltransferase 6 domain-containing protein 1

      UniProtKB/TrEMBL
      A0A8C0LV75, A0A8I3NMB1
      Related
      ENSCAFP00845012500.1, ENSCAFT00845016074.1
      Conserved Domains (1) summary
      cd02515
      Location:130 → 392
      Glyco_transf_6; Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049269.1 Alternate UMICH_Zoey_3.1

      Range
      49297953..49307173
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038486970.1 → XP_038342898.1  putative glycosyltransferase 6 domain-containing protein 1

      Conserved Domains (1) summary
      cd02515
      Location:130 → 392
      Glyco_transf_6; Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

      Range
      49592455..49604170
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038612765.1 → XP_038468693.1  putative glycosyltransferase 6 domain-containing protein 1

      Conserved Domains (1) summary
      cd02515
      Location:130 → 392
      Glyco_transf_6; Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

      Range
      49640783..49650006
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038548814.1 → XP_038404742.1  putative glycosyltransferase 6 domain-containing protein 1

      UniProtKB/TrEMBL
      A0A8C0LV75, A0A8I3NMB1
      Conserved Domains (1) summary
      cd02515
      Location:130 → 392
      Glyco_transf_6; Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      48891252..48902129
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014116951.3 → XP_013972426.2  putative glycosyltransferase 6 domain-containing protein 1

      UniProtKB/TrEMBL
      A0A8C0LV75, A0A8I3NMB1
      Conserved Domains (1) summary
      cd02515
      Location:130 → 392
      Glyco_transf_6; Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens
    Nucleotide Protein
    Heading Accession and Version

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