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    TBXA2R thromboxane A2 receptor [ Canis lupus familiaris (dog) ]

    Gene ID: 485056, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TBXA2Rprovided by VGNC
    Official Full Name
    thromboxane A2 receptorprovided by VGNC
    Primary source
    VGNC:VGNC:47177
    See related
    Ensembl:ENSCAFG00845008905
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See TBXA2R in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (56480706..56489446)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (55545953..55554659)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (56218510..56227219)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (55536340..55545063)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (56019809..56028498)

    Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol-4-phosphate 5-kinase type 1 gamma Neighboring gene cactin, spliceosome C complex subunit Neighboring gene GIPC PDZ domain containing family member 3 Neighboring gene high mobility group 20B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables thromboxane A2 receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in inflammatory response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of blood pressure IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of cytosolic calcium ion concentration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of vasoconstriction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    thromboxane A2 receptor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051824.1 Reference ROS_Cfam_1.0

      Range
      56480706..56489446
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038429139.1 → XP_038285067.1  thromboxane A2 receptor

      UniProtKB/TrEMBL
      A0A8C0KY00, A0A8C0QLX5, A0A8I3NCM2
      Related
      ENSCAFP00845012269.1, ENSCAFT00845015775.1
      Conserved Domains (2) summary
      cd14964
      Location:26 → 52
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:25 → 320
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049280.1 Alternate UMICH_Zoey_3.1

      Range
      55536340..55545063
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038504700.1 → XP_038360628.1  thromboxane A2 receptor

      Conserved Domains (2) summary
      cd14964
      Location:26 → 52
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:25 → 320
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

      Range
      56019809..56028498
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038631936.1 → XP_038487864.1  thromboxane A2 receptor

      Conserved Domains (2) summary
      cd14964
      Location:26 → 52
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:25 → 320
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

      Range
      56218510..56227219
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038567811.1 → XP_038423739.1  thromboxane A2 receptor

      UniProtKB/TrEMBL
      A0A8C0KY00, A0A8C0QLX5, A0A8I3NCM2
      Conserved Domains (2) summary
      cd14964
      Location:26 → 52
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:25 → 320
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      55545953..55554659
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_542174.5 → XP_542174.1  thromboxane A2 receptor

      UniProtKB/TrEMBL
      A0A8C0KY00, A0A8C0QLX5, A0A8I3NCM2
      Conserved Domains (2) summary
      cd14964
      Location:26 → 52
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:25 → 320
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    Nucleotide Protein
    Heading Accession and Version

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