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    IFNB1 interferon beta 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 481558, updated on 17-Aug-2024

    Summary

    Official Symbol
    IFNB1provided by VGNC
    Official Full Name
    interferon beta 1provided by VGNC
    Primary source
    VGNC:VGNC:82287
    See related
    Ensembl:ENSCAFG00845016293
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    NEW
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    Genomic context

    See IFNB1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 11 NC_051815.1 (41610249..41610809, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 11 NC_006593.4 (39330806..39331366, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 11 NC_049232.1 (40726193..40726753, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 11 NC_049271.1 (40302366..40302926, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 11 NC_049752.1 (40090657..40091217, complement)

    Chromosome 11 - NC_051815.1Genomic Context describing neighboring genes Neighboring gene 3-hydroxyacyl-CoA dehydratase 4 Neighboring gene U4 spliceosomal RNA Neighboring gene uncharacterized LOC111097941 Neighboring gene interferon alpha-2-like Neighboring gene uncharacterized LOC119873922 Neighboring gene interferon, alpha 5

    Genomic regions, transcripts, and products

    Pathways from PubChem

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cytokine activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables type I interferon receptor binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    interferon beta
    Names
    interferon, beta 1, fibroblast
    interferon-beta

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001135787.1NP_001129259.1  interferon beta precursor

      See identical proteins and their annotated locations for NP_001129259.1

      Status: PROVISIONAL

      Source sequence(s)
      FJ194477
      UniProtKB/TrEMBL
      A0A8C0MFP8, A0A8P0N4T6, B6E116, F6PK75
      Related
      ENSCAFP00845022775.1, ENSCAFT00845028946.1
      Conserved Domains (1) summary
      pfam00143
      Location:48177
      Interferon; Interferon alpha/beta domain

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051815.1 Reference ROS_Cfam_1.0

      Range
      41610249..41610809 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049271.1 Alternate UMICH_Zoey_3.1

      Range
      40302366..40302926 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049752.1 Alternate UNSW_CanFamBas_1.0

      Range
      40090657..40091217 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049232.1 Alternate UU_Cfam_GSD_1.0

      Range
      40726193..40726753 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006593.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      39330806..39331366 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)