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    CBP sarcoplasmic calcium-binding protein [ Apis mellifera (honey bee) ]

    Gene ID: 412869, updated on 2-Oct-2024

    Summary

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    Gene symbol
    CBP
    Gene description
    sarcoplasmic calcium-binding protein
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apis mellifera
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
    Also known as
    GB46142
    Orthologs
    fruit fly all
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    Genomic context

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    See CBP in Genome Data Viewer
    Location:
    chromosome: LG3
    Exon count:
    6
    Annotation release Status Assembly LG Location
    104 current Amel_HAv3.1 (GCF_003254395.2) LG3 NC_037640.1 (13294009..13296427)
    103 previous assembly Amel_4.5 (GCF_000002195.4) LG3 NC_007072.3 (12847407..12849834)

    Linkage Group LG3 - NC_037640.1Genomic Context describing neighboring genes Neighboring gene cell cycle checkpoint control protein Rad9 Neighboring gene vacuolar protein sorting 29 Neighboring gene ubiquitin fusion-degradation 1-like Neighboring gene glutamate oxaloacetate transaminase 2 Neighboring gene major facilitator superfamily transporter 18 Neighboring gene uncharacterized LOC102654231

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut. Shelomi M, et al. BMC Genomics, 2014 Oct 21. PMID 25331961, Free PMC Article
    2. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
    3. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sarcoplasmic calcium-binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Amel_HAv3.1 Primary Assembly

    Genomic

    1. NC_037640.1 Reference Amel_HAv3.1 Primary Assembly

      Range
      13294009..13296427
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_396321.6 → XP_396321.3  sarcoplasmic calcium-binding protein

      UniProtKB/TrEMBL
      A0A7M7R7X4, A0A8B9B644
      Conserved Domains (2) summary
      cd00051
      Location:180 → 233
      EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
      pfam13499
      Location:181 → 235
      EF-hand_7; EF-hand domain pair
    Nucleotide Protein Strain
    Heading Accession and Version

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