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    IL13 interleukin 13 [ Sus scrofa (pig) ]

    Gene ID: 396721, updated on 17-Aug-2024

    Summary

    Official Symbol
    IL13provided by VGNC
    Official Full Name
    interleukin 13provided by VGNC
    Primary source
    VGNC:VGNC:99763
    See related
    Ensembl:ENSSSCG00000014281
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Also known as
    L13; IL-13
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
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    Genomic context

    See IL13 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 2 NC_010444.4 (134972099..134976672)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 2 NC_010444.3 (140441025..140444068)

    Chromosome 2 - NC_010444.4Genomic Context describing neighboring genes Neighboring gene solute carrier family 22 member 5 Neighboring gene interferon regulatory factor 1 Neighboring gene interleukin 5 Neighboring gene RAD50 double strand break repair protein Neighboring gene kinesin family member 3A Neighboring gene interleukin 4 Neighboring gene septin 8 Neighboring gene cyclin I family member 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cytokine receptor binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_213803.1NP_998968.1  interleukin-13 precursor

      See identical proteins and their annotated locations for NP_998968.1

      Status: PROVISIONAL

      Source sequence(s)
      AF385625
      UniProtKB/Swiss-Prot
      Q95J68
      UniProtKB/TrEMBL
      A0A5G2QQC7, A0A8D1VYU0
      Related
      ENSSSCP00000030285.2, ENSSSCT00000033118.3
      Conserved Domains (1) summary
      pfam03487
      Location:21131
      IL13; Interleukin-13

    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010444.4 Reference Sscrofa11.1 Primary Assembly

      Range
      134972099..134976672
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005661643.3XP_005661700.1  interleukin-13 isoform X3

      See identical proteins and their annotated locations for XP_005661700.1

      UniProtKB/TrEMBL
      A0A5G2QQC7, A0A8D1VYU0, B3GDZ5
      Conserved Domains (1) summary
      pfam03487
      Location:21130
      IL13; Interleukin-13
    2. XM_021080318.1XP_020935977.1  interleukin-13 isoform X1

      UniProtKB/TrEMBL
      A0A8D0UW48, A0A8D1K6G9
      Conserved Domains (1) summary
      pfam03487
      Location:80166
      IL13; Interleukin-13
    3. XM_021080328.1XP_020935987.1  interleukin-13 isoform X2

      UniProtKB/TrEMBL
      A0A8D0UW48
      Conserved Domains (1) summary
      pfam03487
      Location:80165
      IL13; Interleukin-13