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    TMEM247 transmembrane protein 247 [ Homo sapiens (human) ]

    Gene ID: 388946, updated on 2-Nov-2024

    Summary

    Official Symbol
    TMEM247provided by HGNC
    Official Full Name
    transmembrane protein 247provided by HGNC
    Primary source
    HGNC:HGNC:42967
    See related
    Ensembl:ENSG00000284701 AllianceGenome:HGNC:42967
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Summary
    Predicted to be located in membrane. Predicted to be active in endoplasmic reticulum. [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward testis (RPKM 13.2) See more
    Orthologs
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    Genomic context

    See TMEM247 in Genome Data Viewer
    Location:
    2p21
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (46479565..46484425)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (46484583..46489482)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (46706704..46711564)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 1085/2665 Neighboring gene long intergenic non-protein coding RNA 2583 Neighboring gene Sharpr-MPRA regulatory region 2986 Neighboring gene RNA, 7SL, cytoplasmic 817, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15702 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15703 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:46704474-46705040 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr2:46705041-46705607 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15704 Neighboring gene H3K4me1 hESC enhancers GRCh37_chr2:46717178-46717710 and GRCh37_chr2:46717711-46718243 Neighboring gene uncharacterized LOC124906002 Neighboring gene ATPase H+ transporting V1 subunit E2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11448 Neighboring gene ras homolog family member Q

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    General protein information

    Preferred Names
    transmembrane protein 247
    Names
    transmembrane protein ENSP00000343375

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001424184.1NP_001411113.1  transmembrane protein 247

      Status: VALIDATED

      Source sequence(s)
      AC018682
      Consensus CDS
      CCDS56117.1
      UniProtKB/Swiss-Prot
      A6NEH6
      Related
      ENSP00000388684.1, ENST00000434431.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      46479565..46484425
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      46484583..46489482
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)