U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LDHB lactate dehydrogenase B [ Gallus gallus (chicken) ]

    Gene ID: 373997, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    LDHBprovided by CGNC
    Official Full Name
    lactate dehydrogenase Bprovided by CGNC
    Primary source
    CGNC:10005
    See related
    Ensembl:ENSGALG00010013184
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Annotation information
    Annotation category: suggests misassembly
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LDHB in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (67081636..67091184)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (67420581..67430128)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily C member 9 Neighboring gene Potassium inwardly rectifying channel subfamily J member 8 Neighboring gene glycogen synthase 2 Neighboring gene uncharacterized LOC121107602

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Expression of lactate dehydrogenase-A and -B messenger ribonucleic acids in chick glycogen body. Imagawa T, et al. Poult Sci, 2006 Jul. PMID 16830864
    2. Altered expression of lactate dehydrogenase and monocarboxylate transporter involved in lactate metabolism in broiler wooden breast. Zhao D, et al. Poult Sci, 2020 Jan. PMID 32416791, Free PMC Article
    3. Proteomic studies of Syk-interacting proteins using a novel amine-specific isotope tag and GFP nanotrap. Galan JA, et al. J Am Soc Mass Spectrom, 2011 Feb. PMID 21472591, Free PMC Article
    4. Conserved BK channel-protein interactions reveal signals relevant to cell death and survival. Sokolowski B, et al. PLoS One, 2011. PMID 22174833, Free PMC Article
    5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Altered expression of lactate dehydrogenase and monocarboxylate transporter involved in lactate metabolism in broiler wooden breast.
      Title: Altered expression of lactate dehydrogenase and monocarboxylate transporter involved in lactate metabolism in broiler wooden breast.
    2. The expression of LDHA and LDHB in the glycogen body of chick embryos and adult chickens is reported.
      Title: Expression of lactate dehydrogenase-A and -B messenger ribonucleic acids in chick glycogen body.
    Submit: New GeneRIF Correction

    Pathways from PubChem

    Go to the top of the page

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-lactate dehydrogenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carboxylic acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    L-lactate dehydrogenase B chain
    NP_989508.1
    XP_040554065.1
    XP_046762283.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_204177.3 → NP_989508.1  L-lactate dehydrogenase B chain

      See identical proteins and their annotated locations for NP_989508.1

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000012
      UniProtKB/Swiss-Prot
      O93362, P00337, Q548X0
      Conserved Domains (1) summary
      cd05293
      Location:19 → 329
      LDH_1; A subgroup of L-lactate dehydrogenases

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      67081636..67091184
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040698131.2 → XP_040554065.1  L-lactate dehydrogenase B chain isoform X1

      UniProtKB/Swiss-Prot
      O93362, P00337, Q548X0
      Related
      ENSGALP00010018507.1, ENSGALT00010031643.1
      Conserved Domains (1) summary
      cd05293
      Location:19 → 329
      LDH_1; A subgroup of L-lactate dehydrogenases

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      67420581..67430128
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046906327.1 → XP_046762283.1  L-lactate dehydrogenase B chain isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P00337.3 GenPept UniProtKB/Swiss-Prot:P00337

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.