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    Dnajc22 DnaJ heat shock protein family (Hsp40) member C22 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 362998, updated on 2-Nov-2024

    Summary

    Official Symbol
    Dnajc22provided by RGD
    Official Full Name
    DnaJ heat shock protein family (Hsp40) member C22provided by RGD
    Primary source
    RGD:1311098
    See related
    EnsemblRapid:ENSRNOG00000053498 AllianceGenome:RGD:1311098
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1311098
    Summary
    Predicted to be active in membrane. Orthologous to human DNAJC22 (DnaJ heat shock protein family (Hsp40) member C22). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Liver (RPKM 411.9), Kidney (RPKM 275.2) and 5 other tissues See more
    Orthologs
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    Genomic context

    See Dnajc22 in Genome Data Viewer
    Location:
    7q36
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (132136516..132141802)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (130257504..130262880)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (140781676..140786929)

    Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene trophinin associated protein Neighboring gene complement C1q like 4 Neighboring gene spermatogenesis associated, serine-rich 2 Neighboring gene U1 spliceosomal RNA Neighboring gene potassium voltage-gated channel subfamily H member 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    dnaJ homolog subfamily C member 22
    Names
    DnaJ (Hsp40) homolog, subfamily C, member 22

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001014204.1NP_001014226.1  dnaJ homolog subfamily C member 22

      See identical proteins and their annotated locations for NP_001014226.1

      Status: PROVISIONAL

      Source sequence(s)
      BC086949
      UniProtKB/Swiss-Prot
      Q5PR00
      UniProtKB/TrEMBL
      A6KCE1
      Related
      ENSRNOP00000102734.1, ENSRNOT00000167586.1
      Conserved Domains (1) summary
      smart00271
      Location:278335
      DnaJ; DnaJ molecular chaperone homology domain

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086025.1 Reference GRCr8

      Range
      132136516..132141802
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006257363.5XP_006257425.1  dnaJ homolog subfamily C member 22 isoform X1

      See identical proteins and their annotated locations for XP_006257425.1

      UniProtKB/Swiss-Prot
      Q5PR00
      UniProtKB/TrEMBL
      A6KCE1
      Conserved Domains (1) summary
      smart00271
      Location:278335
      DnaJ; DnaJ molecular chaperone homology domain