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    VSNL1 visinin like 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 282124, updated on 4-Oct-2024

    Summary

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    Official Symbol
    VSNL1provided by VGNC
    Official Full Name
    visinin like 1provided by VGNC
    Primary source
    VGNC:VGNC:36841
    See related
    BGD:BT25292; Ensembl:ENSBTAG00000017158
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See VSNL1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 11 NC_037338.1 (80940126..81060773, complement)

    Chromosome 11 - NC_037338.1Genomic Context describing neighboring genes Neighboring gene GEN1 Holliday junction 5' flap endonuclease Neighboring gene structural maintenance of chromosomes 6 Neighboring gene RAD51 associated protein 2 Neighboring gene transfer RNA cysteine (anticodon GCA)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037338.1 Chromosome 11 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cloning and expression of a cDNA encoding a new neurocalcin isoform (neurocalcin alpha) from bovine brain. Kato M, et al. Biochem J, 1998 May 1. PMID 9560316, Free PMC Article
    2. Neurocalcin: a novel calcium-binding protein from bovine brain. Terasawa M, et al. J Biol Chem, 1992 Sep 25. PMID 1527077
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    5. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    visinin-like protein 1
    Names
    neurocalcin alpha

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_174490.3 → NP_776915.1  visinin-like protein 1

      See identical proteins and their annotated locations for NP_776915.1

      Status: PROVISIONAL

      Source sequence(s)
      BC103271
      UniProtKB/Swiss-Prot
      P62763, Q3ZBI8
      UniProtKB/TrEMBL
      A0A3Q1MET3
      Related
      ENSBTAP00000022814.3, ENSBTAT00000022814.5
      Conserved Domains (1) summary
      COG5126
      Location:15 → 181
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037338.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      80940126..81060773 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P62763.2 GenPept UniProtKB/Swiss-Prot:P62763

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials