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    RNVU1-2 RNA, variant U1 small nuclear 2 [ Homo sapiens (human) ]

    Gene ID: 26860, updated on 17-Sep-2024

    Summary

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    Official Symbol
    RNVU1-2provided by HGNC
    Official Full Name
    RNA, variant U1 small nuclear 2provided by HGNC
    Primary source
    HGNC:HGNC:48308
    See related
    Ensembl:ENSG00000238825 AllianceGenome:HGNC:48308
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    U1.1; U1P1; U1P2A; vU1.2; RNU1P2; RNU1P6; vU1.11; RNU1-71; RNU1-12P; RNU1-13P; RNVU1-11
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    Genomic context

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    See RNVU1-2 in Genome Data Viewer
    Location:
    1q21.2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (148388490..148388651, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (146418675..146418836)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (147860642..147860803, complement)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:143672224-143673063 Neighboring gene RNA, U1 small nuclear 155 pseudogene Neighboring gene microRNA 6077 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr1:143686659-143687364 Neighboring gene PDE4DIP pseudogene 6 Neighboring gene RNA, variant U1 small nuclear 3 Neighboring gene uncharacterized LOC124904400

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Human U1 RNA pseudogenes may be generated by both DNA- and RNA-mediated mechanisms. Denison RA, et al. Mol Cell Biol, 1982 Jul. PMID 6085956, Free PMC Article
    2. Differentially expressed, variant U1 snRNAs regulate gene expression in human cells. O'Reilly D, et al. Genome Res, 2013 Feb. PMID 23070852, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Other Names

    • RNA, U1 small nuclear 12, pseudogene
    • RNA, U1 small nuclear 13, pseudogene
    • RNA, U1 small nuclear pseudogene 2
    • RNA, U1 small nuclear pseudogene 6
    • RNA, variant U1 small nuclear 11

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_044775.1 

      Range
      101..262
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      148388490..148388651 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      146418675..146418836
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NG_001263.2: Suppressed sequence

      Description
      NG_001263.2: This RefSeq was permanently suppressed because it is now thought that this locus is transcribed.
    Nucleotide Protein
    Heading Accession and Version

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