NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001278458.2 → NP_001265387.1 cordon-bleu protein-like 1 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AB023194, AC019181, AI261693, AK294937
- Consensus CDS
-
CCDS63046.1
- UniProtKB/TrEMBL
- A0A0D9SG04, B7Z2P5
- Related
- ENSP00000487041.2, ENST00000629362.2
- Conserved Domains (2) summary
-
- pfam09469
Location:197 → 275
- Cobl; Cordon-bleu ubiquitin-like domain
- cl00155
Location:113 → 182
- UBQ; Ubiquitin-like proteins
-
NM_001278460.2 → NP_001265389.1 cordon-bleu protein-like 1 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks three alternate in-frame exons compared to variant 1. The resulting isoform (3) has the same N- and C-termini but is shorter compared to isoform 1.
- Source sequence(s)
-
AB023194, AC019181, AI261693, AK225849, AK294937
- Consensus CDS
-
CCDS92884.1
- UniProtKB/TrEMBL
- A0A0X1KG75, B7Z2P5
- Related
- ENSP00000387326.5, ENST00000409184.8
- Conserved Domains (2) summary
-
- pfam09469
Location:190 → 268
- Cobl; Cordon-bleu ubiquitin-like domain
- cl00155
Location:106 → 175
- UBQ; Ubiquitin-like proteins
-
NM_001278461.2 → NP_001265390.1 cordon-bleu protein-like 1 isoform 4
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and coding sequence and lacks two alternate in-frame exons compared to variant 1. The resulting isoform (4) is shorter at the N-terminus and lacks two alternate internal segments compared to variant 1.
- Source sequence(s)
-
AB023194, AC019181, AI261693, BC071588
- Consensus CDS
-
CCDS63045.1
- UniProtKB/Swiss-Prot
- A6NMZ3, Q53SF7, Q6IQ33, Q7Z3I6, Q9BRH4, Q9UG88, Q9Y2I3
- UniProtKB/TrEMBL
-
B7Z2P5
- Related
- ENSP00000364607.2, ENST00000375458.6
- Conserved Domains (2) summary
-
- PHA03247
Location:789 → 1026
- PHA03247; large tegument protein UL36; Provisional
- pfam09469
Location:144 → 222
- Cobl; Cordon-bleu ubiquitin-like domain
-
NM_001365670.2 → NP_001352599.1 cordon-bleu protein-like 1 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC019181
- UniProtKB/TrEMBL
-
B7Z2P5
- Conserved Domains (2) summary
-
- pfam09469
Location:190 → 268
- Cobl; Cordon-bleu ubiquitin-like domain
- cl26464
Location:834 → 1071
- Atrophin-1; Atrophin-1 family
-
NM_001365671.1 → NP_001352600.1 cordon-bleu protein-like 1 isoform 6
Status: VALIDATED
- Source sequence(s)
-
AC019181, AC107075
- UniProtKB/TrEMBL
-
B7Z2P5
- Conserved Domains (2) summary
-
- pfam09469
Location:190 → 268
- Cobl; Cordon-bleu ubiquitin-like domain
- cl26464
Location:848 → 1085
- Atrophin-1; Atrophin-1 family
-
NM_001365672.2 → NP_001352601.1 cordon-bleu protein-like 1 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC019181
- Consensus CDS
-
CCDS63045.1
- UniProtKB/Swiss-Prot
- A6NMZ3, Q53SF7, Q6IQ33, Q7Z3I6, Q9BRH4, Q9UG88, Q9Y2I3
- UniProtKB/TrEMBL
-
B7Z2P5
- Related
- ENSP00000498242.1, ENST00000652658.2
- Conserved Domains (2) summary
-
- PHA03247
Location:789 → 1026
- PHA03247; large tegument protein UL36; Provisional
- pfam09469
Location:144 → 222
- Cobl; Cordon-bleu ubiquitin-like domain
-
NM_001365673.2 → NP_001352602.1 cordon-bleu protein-like 1 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC019181
- Consensus CDS
-
CCDS63045.1
- UniProtKB/Swiss-Prot
- A6NMZ3, Q53SF7, Q6IQ33, Q7Z3I6, Q9BRH4, Q9UG88, Q9Y2I3
- UniProtKB/TrEMBL
-
B7Z2P5
- Conserved Domains (2) summary
-
- PHA03247
Location:789 → 1026
- PHA03247; large tegument protein UL36; Provisional
- pfam09469
Location:144 → 222
- Cobl; Cordon-bleu ubiquitin-like domain
-
NM_001365674.2 → NP_001352603.1 cordon-bleu protein-like 1 isoform 7
Status: VALIDATED
- Source sequence(s)
-
AC019181
- UniProtKB/TrEMBL
-
B7Z2P5
- Conserved Domains (2) summary
-
- pfam09469
Location:144 → 222
- Cobl; Cordon-bleu ubiquitin-like domain
- cl26464
Location:802 → 1039
- Atrophin-1; Atrophin-1 family
-
NM_001365675.2 → NP_001352604.1 cordon-bleu protein-like 1 isoform 7
Status: VALIDATED
- Source sequence(s)
-
AC019181
- UniProtKB/TrEMBL
-
B7Z2P5
- Conserved Domains (2) summary
-
- pfam09469
Location:144 → 222
- Cobl; Cordon-bleu ubiquitin-like domain
- cl26464
Location:802 → 1039
- Atrophin-1; Atrophin-1 family
-
NM_014900.5 → NP_055715.3 cordon-bleu protein-like 1 isoform 2
See identical proteins and their annotated locations for NP_055715.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and coding sequence and lacks two alternate in-frame exons compared to variant 1. The resulting isoform (2) is shorter at the N-terminus and lacks two alternate internal segments compared to isoform 1.
- Source sequence(s)
-
AB023194, AC019181, AI261693, BC071588
- Consensus CDS
-
CCDS2223.2
- UniProtKB/TrEMBL
-
B7Z2P5
- Related
- ENSP00000341360.4, ENST00000342193.8
- Conserved Domains (2) summary
-
- pfam09469
Location:144 → 222
- Cobl; Cordon-bleu ubiquitin-like domain
- cl00155
Location:60 → 129
- UBQ; Ubiquitin-like proteins
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000002.12 Reference GRCh38.p14 Primary Assembly
- Range
-
164657931..164842076 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060926.1 Alternate T2T-CHM13v2.0
- Range
-
165115257..165299434 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)