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    LOC18606913 arabinosyltransferase XEG113 [ Theobroma cacao (cacao) ]

    Gene ID: 18606913, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC18606913
    Gene description
    arabinosyltransferase XEG113
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Theobroma cacao
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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    Genomic context

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    See LOC18606913 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    100 current Criollo_cocoa_genome_V2 (GCF_000208745.1) 3 NC_030852.1 (36066525..36074027, complement)

    Chromosome 3 - NC_030852.1Genomic Context describing neighboring genes Neighboring gene ABC transporter E family member 2 Neighboring gene pentatricopeptide repeat-containing protein At4g19220, mitochondrial Neighboring gene uncharacterized LOC108661223 Neighboring gene pto-interacting protein 1 Neighboring gene abscisic acid 8'-hydroxylase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_030852.1 Chromosome 3 Reference Criollo_cocoa_genome_V2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables arabinosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell wall pectin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    arabinosyltransferase XEG113

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Theobroma cacao Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Criollo_cocoa_genome_V2 Primary Assembly

    Genomic

    1. NC_030852.1 Reference Criollo_cocoa_genome_V2 Primary Assembly

      Range
      36066525..36074027 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007040803.2 → XP_007040865.2  arabinosyltransferase XEG113

      UniProtKB/TrEMBL
      A0A061G711

    2. XM_018118202.1 → XP_017973691.1  arabinosyltransferase XEG113

      UniProtKB/TrEMBL
      A0A061G711
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases