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    LOC18600233 ornithine decarboxylase [ Theobroma cacao (cacao) ]

    Gene ID: 18600233, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC18600233
    Gene description
    ornithine decarboxylase
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Theobroma cacao
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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    Genomic context

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    See LOC18600233 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current Criollo_cocoa_genome_V2 (GCF_000208745.1) 5 NC_030854.1 (37051412..37052802)

    Chromosome 5 - NC_030854.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S3a-1 Neighboring gene protein tesmin/TSO1-like CXC 2 Neighboring gene ornithine decarboxylase-like Neighboring gene ornithine decarboxylase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_030854.1 Chromosome 5 Reference Criollo_cocoa_genome_V2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ornithine decarboxylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in putrescine biosynthetic process from ornithine IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ornithine decarboxylase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Theobroma cacao Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Criollo_cocoa_genome_V2 Primary Assembly

    Genomic

    1. NC_030854.1 Reference Criollo_cocoa_genome_V2 Primary Assembly

      Range
      37051412..37052802
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018120827.1 → XP_017976316.1  ornithine decarboxylase

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases