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    LOC18600122 protein EIN4 [ Theobroma cacao (cacao) ]

    Gene ID: 18600122, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC18600122
    Gene description
    protein EIN4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Theobroma cacao
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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    Genomic context

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    See LOC18600122 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current Criollo_cocoa_genome_V2 (GCF_000208745.1) 5 NC_030854.1 (36381106..36385561, complement)

    Chromosome 5 - NC_030854.1Genomic Context describing neighboring genes Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene methyltransferase-like protein 6 Neighboring gene AT-hook motif nuclear-localized protein 14 Neighboring gene C-Myc-binding protein homolog

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_030854.1 Chromosome 5 Reference Criollo_cocoa_genome_V2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ethylene binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ethylene receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphorelay sensor kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in phosphorelay signal transduction system IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to ethylene IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein EIN4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Theobroma cacao Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Criollo_cocoa_genome_V2 Primary Assembly

    Genomic

    1. NC_030854.1 Reference Criollo_cocoa_genome_V2 Primary Assembly

      Range
      36381106..36385561 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018122032.1 → XP_017977521.1  protein EIN4 isoform X1

      UniProtKB/TrEMBL
      A0A061F2R3

    2. XM_007030423.2 → XP_007030485.2  protein EIN4 isoform X1

      UniProtKB/TrEMBL
      A0A061F2R3

    3. XM_007030424.2 → XP_007030486.2  protein EIN4 isoform X2

      UniProtKB/TrEMBL
      A0A061F241
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases