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    LOC18597575 auxin transporter-like protein 2 [ Theobroma cacao (cacao) ]

    Gene ID: 18597575, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC18597575
    Gene description
    auxin transporter-like protein 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Theobroma cacao
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current Criollo_cocoa_genome_V2 (GCF_000208745.1) 5 NC_030854.1 (890626..895384, complement)

    Chromosome 5 - NC_030854.1Genomic Context describing neighboring genes Neighboring gene lactosylceramide 4-alpha-galactosyltransferase Neighboring gene 30S ribosomal protein S31, chloroplastic Neighboring gene protein NRT1/ PTR FAMILY 5.7 Neighboring gene probable aquaporin PIP1-4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_030854.1 Chromosome 5 Reference Criollo_cocoa_genome_V2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    auxin transporter-like protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Theobroma cacao Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Criollo_cocoa_genome_V2 Primary Assembly

    Genomic

    1. NC_030854.1 Reference Criollo_cocoa_genome_V2 Primary Assembly

      Range
      890626..895384 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007026700.2 → XP_007026762.2  auxin transporter-like protein 2

      UniProtKB/TrEMBL
      A0A061EYD3
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases