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    LOC18596447 solanesyl diphosphate synthase 3, chloroplastic/mitochondrial [ Theobroma cacao (cacao) ]

    Gene ID: 18596447, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC18596447
    Gene description
    solanesyl diphosphate synthase 3, chloroplastic/mitochondrial
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Theobroma cacao
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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    Genomic context

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    See LOC18596447 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    100 current Criollo_cocoa_genome_V2 (GCF_000208745.1) 6 NC_030855.1 (21637154..21642690, complement)

    Chromosome 6 - NC_030855.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At1g09900 Neighboring gene transcriptional regulator Myc Neighboring gene solanesyl diphosphate synthase 3, chloroplastic/mitochondrial Neighboring gene transcription termination factor MTEF1, chloroplastic Neighboring gene uncharacterized LOC18596450

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_030855.1 Chromosome 6 Reference Criollo_cocoa_genome_V2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables prenyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in isoprenoid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ubiquinone biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of transferase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    solanesyl diphosphate synthase 3, chloroplastic/mitochondrial; solanesyl-diphosphate synthase 1, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Theobroma cacao Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Criollo_cocoa_genome_V2 Primary Assembly

    Genomic

    1. NC_030855.1 Reference Criollo_cocoa_genome_V2 Primary Assembly

      Range
      21637154..21642690 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007024918.2 → XP_007024980.1  solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isoform X3

      See identical proteins and their annotated locations for XP_007024980.1

      UniProtKB/TrEMBL
      A0A061GEN9
      Conserved Domains (1) summary
      cl00210
      Location:1 → 319
      Isoprenoid_Biosyn_C1; Isoprenoid Biosynthesis enzymes, Class 1

    2. XM_007024917.2 → XP_007024979.2  solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A061GDF9

    3. XM_007024919.2 → XP_007024981.2  solanesyl-diphosphate synthase 1, mitochondrial isoform X2

      UniProtKB/TrEMBL
      A0A061GDW8
    Nucleotide Protein
    Heading Accession and Version

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