U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC18594464 mitochondrial inner membrane protease subunit 1 [ Theobroma cacao (cacao) ]

    Gene ID: 18594464, updated on 9-Nov-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC18594464
    Gene description
    mitochondrial inner membrane protease subunit 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Theobroma cacao
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC18594464 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current Criollo_cocoa_genome_V2 (GCF_000208745.1) 7 NC_030856.1 (8951912..8955280)

    Chromosome 7 - NC_030856.1Genomic Context describing neighboring genes Neighboring gene major pollen allergen Ole e 10 Neighboring gene solanesyl diphosphate synthase 1 Neighboring gene uncharacterized protein YnbD Neighboring gene cytochrome P450 72A15

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_030856.1 Chromosome 7 Reference Criollo_cocoa_genome_V2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein processing involved in protein targeting to mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal peptide processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of mitochondrial inner membrane peptidase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    mitochondrial inner membrane protease subunit 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Theobroma cacao Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Criollo_cocoa_genome_V2 Primary Assembly

    Genomic

    1. NC_030856.1 Reference Criollo_cocoa_genome_V2 Primary Assembly

      Range
      8951912..8955280
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007022031.2 → XP_007022093.2  mitochondrial inner membrane protease subunit 1

      UniProtKB/TrEMBL
      A0A061FA89
      Conserved Domains (1) summary
      TIGR02227
      Location:31 → 154
      sigpep_I_bact; signal peptidase I, bacterial type

    2. XM_018124922.1 → XP_017980411.1  mitochondrial inner membrane protease subunit 1

      UniProtKB/TrEMBL
      A0A061FA89
      Conserved Domains (1) summary
      TIGR02227
      Location:31 → 154
      sigpep_I_bact; signal peptidase I, bacterial type

    3. XM_018124921.1 → XP_017980410.1  mitochondrial inner membrane protease subunit 1

      UniProtKB/TrEMBL
      A0A061FA89
      Conserved Domains (1) summary
      TIGR02227
      Location:31 → 154
      sigpep_I_bact; signal peptidase I, bacterial type

    4. XM_007022030.2 → XP_007022092.2  mitochondrial inner membrane protease subunit 1

      UniProtKB/TrEMBL
      A0A061FA89
      Conserved Domains (1) summary
      TIGR02227
      Location:31 → 154
      sigpep_I_bact; signal peptidase I, bacterial type
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases