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    LOC18592056 histone-lysine N-methyltransferase ATXR7 [ Theobroma cacao (cacao) ]

    Gene ID: 18592056, updated on 25-Jan-2024

    Summary

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    Gene symbol
    LOC18592056
    Gene description
    histone-lysine N-methyltransferase ATXR7
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Theobroma cacao
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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    Genomic context

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    See LOC18592056 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    100 current Criollo_cocoa_genome_V2 (GCF_000208745.1) 8 NC_030857.1 (4714957..4723794)

    Chromosome 8 - NC_030857.1Genomic Context describing neighboring genes Neighboring gene UDP-galactose transporter 2 Neighboring gene probable cellulose synthase A catalytic subunit 5 [UDP-forming] Neighboring gene uncharacterized protein At1g76660 Neighboring gene stromal processing peptidase, chloroplastic

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_030857.1 Chromosome 8 Reference Criollo_cocoa_genome_V2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone H3K4 methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Set1C/COMPASS complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    histone-lysine N-methyltransferase ATXR7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Theobroma cacao Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Criollo_cocoa_genome_V2 Primary Assembly

    Genomic

    1. NC_030857.1 Reference Criollo_cocoa_genome_V2 Primary Assembly

      Range
      4714957..4723794
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007018545.2 → XP_007018607.2  histone-lysine N-methyltransferase ATXR7 isoform X1

      UniProtKB/TrEMBL
      A0A061FFJ2

    2. XM_018126068.1 → XP_017981557.1  histone-lysine N-methyltransferase ATXR7 isoform X1

      UniProtKB/TrEMBL
      A0A061FFJ2

    3. XM_007018544.2 → XP_007018606.2  histone-lysine N-methyltransferase ATXR7 isoform X1

      UniProtKB/TrEMBL
      A0A061FFJ2

    4. XM_018126069.1 → XP_017981558.1  histone-lysine N-methyltransferase ATXR7 isoform X2

      UniProtKB/TrEMBL
      A0A061FFJ2
    Nucleotide Protein
    Heading Accession and Version

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