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    LOC18586978 ABSCISIC ACID-INSENSITIVE 5-like protein 2 [ Theobroma cacao (cacao) ]

    Gene ID: 18586978, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC18586978
    Gene description
    ABSCISIC ACID-INSENSITIVE 5-like protein 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Theobroma cacao
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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    Genomic context

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    Location:
    chromosome: 10
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current Criollo_cocoa_genome_V2 (GCF_000208745.1) 10 NC_030859.1 (16780422..16787418, complement)

    Chromosome 10 - NC_030859.1Genomic Context describing neighboring genes Neighboring gene histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 Neighboring gene heat shock 70 kDa protein 17 Neighboring gene protein SAD1/UNC-84 domain protein 2 Neighboring gene type I inositol polyphosphate 5-phosphatase 10

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_030859.1 Chromosome 10 Reference Criollo_cocoa_genome_V2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ABSCISIC ACID-INSENSITIVE 5-like protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Theobroma cacao Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Criollo_cocoa_genome_V2 Primary Assembly

    Genomic

    1. NC_030859.1 Reference Criollo_cocoa_genome_V2 Primary Assembly

      Range
      16780422..16787418 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007010604.2 → XP_007010666.1  ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1

      See identical proteins and their annotated locations for XP_007010666.1

      UniProtKB/TrEMBL
      A0A061FQW4, A0A061FRD0
      Conserved Domains (1) summary
      cd14707
      Location:251 → 305
      bZIP_plant_BZIP46; Basic leucine zipper (bZIP) domain of uncharaterized Plant BZIP transcription factors: a DNA-binding and dimerization domain

    2. XM_007010603.2 → XP_007010665.1  ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1

      See identical proteins and their annotated locations for XP_007010665.1

      UniProtKB/TrEMBL
      A0A061FQW4, A0A061FRD0
      Conserved Domains (1) summary
      cd14707
      Location:251 → 305
      bZIP_plant_BZIP46; Basic leucine zipper (bZIP) domain of uncharaterized Plant BZIP transcription factors: a DNA-binding and dimerization domain

    3. XM_018129648.1 → XP_017985137.1  ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A061FS30, A0A061FXC8
    Nucleotide Protein
    Heading Accession and Version

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