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    LOC18585710 DNA replication ATP-dependent helicase/nuclease DNA2 [ Theobroma cacao (cacao) ]

    Gene ID: 18585710, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC18585710
    Gene description
    DNA replication ATP-dependent helicase/nuclease DNA2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Theobroma cacao
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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    Genomic context

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    Location:
    chromosome: 10
    Exon count:
    34
    Annotation release Status Assembly Chr Location
    100 current Criollo_cocoa_genome_V2 (GCF_000208745.1) 10 NC_030859.1 (93910..105039, complement)

    Chromosome 10 - NC_030859.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC18585708 Neighboring gene putative ABC transporter C family member 15 Neighboring gene protein PIN-LIKES 3 Neighboring gene sister chromatid cohesion protein DCC1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_030859.1 Chromosome 10 Reference Criollo_cocoa_genome_V2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 5'-flap endonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables single-stranded DNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in replication fork reversal IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA replication ATP-dependent helicase/nuclease DNA2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Theobroma cacao Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Criollo_cocoa_genome_V2 Primary Assembly

    Genomic

    1. NC_030859.1 Reference Criollo_cocoa_genome_V2 Primary Assembly

      Range
      93910..105039 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018128575.1 → XP_017984064.1  DNA replication ATP-dependent helicase/nuclease DNA2 isoform X2

      UniProtKB/TrEMBL
      A0A061FKT9

    2. XM_018128576.1 → XP_017984065.1  DNA replication ATP-dependent helicase/nuclease DNA2 isoform X3

      UniProtKB/TrEMBL
      A0A061FLH1

    3. XM_018128574.1 → XP_017984063.1  DNA replication ATP-dependent helicase/nuclease DNA2 isoform X1

      UniProtKB/TrEMBL
      A0A061FLH1

    4. XM_018128577.1 → XP_017984066.1  DNA replication ATP-dependent helicase/nuclease DNA2 isoform X4

      UniProtKB/TrEMBL
      A0A061FKT9
    Nucleotide Protein
    Heading Accession and Version

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