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    hacB homoaconitase small subunit [ Methanosarcina acetivorans C2A ]

    Gene ID: 1473111, updated on 22-Oct-2024

    Summary

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    Gene symbol
    hacB
    Gene description
    homoaconitase small subunit
    Locus tag
    MA_RS06360
    Gene type
    protein coding
    Organism
    Methanosarcina acetivorans C2A (strain: C2A, type-material: type strain of Methanosarcina acetivorans)
    Lineage
    Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina
    Old locus tag
    MA1223; MA_1223
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    Genomic context

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    Sequence:
    NC_003552.1 (1456238..1456732)

    NC_003552.1Genomic Context describing neighboring genes Neighboring gene NifB/NifX family molybdenum-iron cluster-binding protein Neighboring gene ABC transporter substrate-binding protein Neighboring gene hypothetical protein Neighboring gene homocitrate synthase Neighboring gene LeuA family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003552.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Substrate specificity determinants of the methanogen homoaconitase enzyme: structure and function of the small subunit. Jeyakanthan J, et al. Biochemistry, 2010 Mar 30. PMID 20170198
    2. The genome of M. acetivorans reveals extensive metabolic and physiological diversity. Galagan JE, et al. Genome Res, 2002 Apr. PMID 11932238, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    homoaconitase small subunit
    WP_011021244.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003552.1 Reference assembly

      Range
      1456238..1456732
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011021244.1 homoaconitase small subunit [Methanosarcina acetivorans]

      See identical proteins and their annotated locations for WP_011021244.1

      UniProtKB/Swiss-Prot
      Q8TRF7
      Conserved Domains (1) summary
      TIGR02087
      Location:7 → 159
      LEUD_arch; 3-isopropylmalate dehydratase, small subunit
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8TRF7.1

    Gene LinkOut

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    Molecular Biology Databases