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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001177381.2 → NP_001170852.1 cytoplasmic polyadenylation element-binding protein 2 isoform C
Status: REVIEWED
- Description
- Transcript Variant: This variant (C) lacks an alternate in-frame exon and uses an alternate in-frame splice site in the central coding region, compared to variant D. The resulting isoform (C) differs at an internal region, compared to isoform D.
- Source sequence(s)
-
AC098829, AC105289, BC103939
- Consensus CDS
-
CCDS56326.1
- UniProtKB/Swiss-Prot
-
Q7Z5Q1
- Related
- ENSP00000414270.2, ENST00000442003.6
- Conserved Domains (4) summary
-
- COG0724
Location:737 → 912
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
- cd12724
Location:750 → 841
- RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
- cd12726
Location:858 → 938
- RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
- pfam16366
Location:933 → 994
- CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
-
NM_001177382.2 → NP_001170853.1 cytoplasmic polyadenylation element-binding protein 2 isoform D
Status: REVIEWED
- Description
- Transcript Variant: This variant (D) represents the longest transcript and encodes the longest isoform (D).
- Source sequence(s)
-
AC098829, AC105289, BC103942
- Consensus CDS
-
CCDS56325.1
- UniProtKB/Swiss-Prot
-
Q7Z5Q1
- Related
- ENSP00000443985.1, ENST00000538197.7
- Conserved Domains (4) summary
-
- COG0724
Location:764 → 939
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
- cd12724
Location:777 → 868
- RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
- cd12726
Location:885 → 965
- RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
- pfam16366
Location:960 → 1021
- CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
-
NM_001177383.2 → NP_001170854.1 cytoplasmic polyadenylation element-binding protein 2 isoform E
Status: REVIEWED
- Description
- Transcript Variant: This variant (E) lacks an alternate in-frame exon in the central coding region, compared to variant D. The resulting isoform (E) lacks an internal segment, compared to isoform D.
- Source sequence(s)
-
AC098829, AC105289, BC103941
- Consensus CDS
-
CCDS93479.1
- UniProtKB/TrEMBL
-
A0A5K1VW71
- Related
- ENSP00000371832.4, ENST00000382395.8
- Conserved Domains (4) summary
-
- COG0724
Location:734 → 909
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
- cd12724
Location:747 → 838
- RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
- cd12726
Location:855 → 935
- RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
- pfam16366
Location:930 → 991
- CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
-
NM_001177384.2 → NP_001170855.1 cytoplasmic polyadenylation element-binding protein 2 isoform F
Status: REVIEWED
- Description
- Transcript Variant: This variant (F) lacks two alternate in-frame exons and uses an alternate in-frame splice site in the central coding region, compared to variant D. The resulting isoform (F) differs at two internal regions, compared to isoform D.
- Source sequence(s)
-
AC098829, AC105289, BC105925
- Consensus CDS
-
CCDS93480.1
- UniProtKB/TrEMBL
-
A0A5K1VW79
- Related
- ENSP00000371838.4, ENST00000382401.8
- Conserved Domains (4) summary
-
- COG0724
Location:729 → 904
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
- cd12724
Location:742 → 833
- RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
- cd12726
Location:850 → 930
- RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
- pfam16366
Location:925 → 986
- CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
-
NM_182485.3 → NP_872291.2 cytoplasmic polyadenylation element-binding protein 2 isoform B
Status: REVIEWED
- Description
- Transcript Variant: This variant (B) lacks two alternate in-frame exons in the central coding region, compared to variant D. The resulting isoform (B) lacks two internal segments, compared to isoform D.
- Source sequence(s)
-
AC098829, AC105289, AY247744
- UniProtKB/TrEMBL
-
A0A5K1VW93
- Related
- ENSP00000424084.2, ENST00000507071.6
- Conserved Domains (4) summary
-
- COG0724
Location:756 → 931
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
- cd12724
Location:769 → 860
- RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
- cd12726
Location:877 → 957
- RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
- pfam16366
Location:952 → 1013
- CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
-
NM_182646.3 → NP_872587.2 cytoplasmic polyadenylation element-binding protein 2 isoform A
Status: REVIEWED
- Description
- Transcript Variant: This variant (A) lacks an alternate in-frame exon in the central coding region, compared to variant D. The resulting isoform (A) lacks an internal segment, compared to isoform D.
- Source sequence(s)
-
AC098829, AC105289, AY255519
- UniProtKB/TrEMBL
-
A0A5K1VW61
- Related
- ENSP00000334058.4, ENST00000345451.8
- Conserved Domains (4) summary
-
- COG0724
Location:726 → 901
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
- cd12724
Location:739 → 830
- RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
- cd12726
Location:847 → 927
- RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
- pfam16366
Location:922 → 983
- CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000004.12 Reference GRCh38.p14 Primary Assembly
- Range
-
15002481..15070151
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005248135.4 → XP_005248192.2 cytoplasmic polyadenylation element-binding protein 2 isoform X1
- Conserved Domains (4) summary
-
- COG0724
Location:767 → 942
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
- cd12724
Location:780 → 871
- RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
- cd12726
Location:888 → 968
- RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
- pfam16366
Location:963 → 1024
- CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
-
XM_011513777.4 → XP_011512079.1 cytoplasmic polyadenylation element-binding protein 2 isoform X2
- Conserved Domains (4) summary
-
- COG0724
Location:759 → 934
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
- cd12724
Location:772 → 863
- RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
- cd12726
Location:880 → 960
- RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
- pfam16366
Location:955 → 1016
- CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
-
XM_011513778.4 → XP_011512080.1 cytoplasmic polyadenylation element-binding protein 2 isoform X3
-
XM_011513779.3 → XP_011512081.1 cytoplasmic polyadenylation element-binding protein 2 isoform X4
-
XM_017007734.3 → XP_016863223.1 cytoplasmic polyadenylation element-binding protein 2 isoform X5
- Conserved Domains (3) summary
-
- pfam16366
Location:389 → 450
- CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
- cd12724
Location:206 → 297
- RRM1_CPEB2_like; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
- cd12726
Location:314 → 394
- RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
-
XM_017007733.2 → XP_016863222.1 cytoplasmic polyadenylation element-binding protein 2 isoform X5
- Conserved Domains (3) summary
-
- pfam16366
Location:389 → 450
- CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
- cd12724
Location:206 → 297
- RRM1_CPEB2_like; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
- cd12726
Location:314 → 394
- RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
-
XM_047449609.1 → XP_047305565.1 cytoplasmic polyadenylation element-binding protein 2 isoform X6
Reference GRCh38.p14 PATCHES
Genomic
-
NW_013171799.1 Reference GRCh38.p14 PATCHES
- Range
-
74375..89176
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060928.1 Alternate T2T-CHM13v2.0
- Range
-
14984261..15051932
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054348925.1 → XP_054204900.1 cytoplasmic polyadenylation element-binding protein 2 isoform X1
-
XM_054348926.1 → XP_054204901.1 cytoplasmic polyadenylation element-binding protein 2 isoform X2
-
XM_054348927.1 → XP_054204902.1 cytoplasmic polyadenylation element-binding protein 2 isoform X3
-
XM_054348928.1 → XP_054204903.1 cytoplasmic polyadenylation element-binding protein 2 isoform X4
-
XM_054348929.1 → XP_054204904.1 cytoplasmic polyadenylation element-binding protein 2 isoform X5
-
XM_054348930.1 → XP_054204905.1 cytoplasmic polyadenylation element-binding protein 2 isoform X5
-
XM_054348931.1 → XP_054204906.1 cytoplasmic polyadenylation element-binding protein 2 isoform X6