U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    prgJ cytoplasmic cell invasion protein [ Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ]

    Gene ID: 1254395, updated on 6-Oct-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    prgJ
    Gene description
    cytoplasmic cell invasion protein
    Locus tag
    STM2872
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (strain: LT2, serovar: Typhimurium, sub-species: enterica, culture-collection: ATCC:700720, culture-collection: SGSC:1412, type-material: type strain of Salmonella enterica)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_003197.2 (3015758..3016069, complement)

    NC_003197.2Genomic Context describing neighboring genes Neighboring gene putative cytoplasmic protein Neighboring gene putative flagellar biosynthesis/type III secretory pathway protein Neighboring gene putative inner membrane protein Neighboring gene cell invasion protein Neighboring gene cytoplasmic cell invasion protein Neighboring gene cell invasion protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003197.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The inner rod protein controls substrate switching and needle length in a Salmonella type III secretion system. Lefebre MD, et al. Proc Natl Acad Sci U S A, 2014 Jan 14. PMID 24379359, Free PMC Article
    2. NAIP proteins are required for cytosolic detection of specific bacterial ligands in vivo. Rauch I, et al. J Exp Med, 2016 May 2. PMID 27045008, Free PMC Article
    3. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. McClelland M, et al. Nature, 2001 Oct 25. PMID 11677609

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The inner rod protein controls substrate switching and needle length in a Salmonella type III secretion system.
      Title: The inner rod protein controls substrate switching and needle length in a Salmonella type III secretion system.
    Submit: New GeneRIF Correction

    General gene information

    Go to the top of the page Help

    regulatory

    • Loc: c3016069-3016064 regulatory_class = ribosome_binding_site

    General protein information

    Go to the top of the page Help
    Preferred Names
    cytoplasmic cell invasion protein
    NP_461793.1
    • PRGJ protein. (SW:PRGJ_SALTY)

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003197.2 Reference assembly

      Range
      3015758..3016069 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_461793.1 cytoplasmic cell invasion protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

      See identical proteins and their annotated locations for NP_461793.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5V3W9W5, A0A5W2V8P9, A0A5Y1V425, A0A730UX14, A0A736MTP4, A0A754E1T4
      Conserved Domains (1) summary
      PRK15325
      Location:22 → 101
      PRK15325; type III secretion system inner rod protein PrgJ
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P41785.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.