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    Crisp1 cysteine-rich secretory protein 1 [ Mus musculus (house mouse) ]

    Gene ID: 11571, updated on 2-Nov-2024

    Summary

    Official Symbol
    Crisp1provided by MGI
    Official Full Name
    cysteine-rich secretory protein 1provided by MGI
    Primary source
    MGI:MGI:102553
    See related
    Ensembl:ENSMUSG00000025431 AllianceGenome:MGI:102553
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Aeg1; SCP 1; CRISP-1
    Summary
    Predicted to be located in extracellular region and specific granule. Predicted to be active in extracellular space. Orthologous to human CRISP3 (cysteine rich secretory protein 3). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward genital fat pad adult (RPKM 864.1) See more
    Orthologs
    NEW
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    Genomic context

    See Crisp1 in Genome Data Viewer
    Location:
    17 B2; 17 19.47 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (40604649..40630098, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (40293758..40319207, complement)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene phosphoglycerate kinase 2 Neighboring gene cysteine-rich secretory protein 3 Neighboring gene STARR-seq mESC enhancer starr_42540 Neighboring gene solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5 pseudogene Neighboring gene solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    located_in extracellular region ISO
    Inferred from Sequence Orthology
    more info
     
    located_in extracellular region ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in specific granule ISO
    Inferred from Sequence Orthology
    more info
     
    located_in transport vesicle IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    cysteine-rich secretory protein 1
    Names
    acidic epididymal glycoprotein 1
    sperm-coating glycoprotein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009638.3NP_033768.3  cysteine-rich secretory protein 1 precursor

      See identical proteins and their annotated locations for NP_033768.3

      Status: VALIDATED

      Source sequence(s)
      AC154497, AK009449, M92849
      Consensus CDS
      CCDS28784.1
      UniProtKB/Swiss-Prot
      Q03401
      UniProtKB/TrEMBL
      Q545H0, Q91XA3
      Related
      ENSMUSP00000026498.5, ENSMUST00000026498.5
      Conserved Domains (2) summary
      cd05383
      Location:37172
      SCP_CRISP; SCP_CRISP: SCP-like extracellular protein domain, CRISP-like sub-family. The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a ...
      pfam08562
      Location:190244
      Crisp; Crisp

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      40604649..40630098 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)