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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_052999.4 → NP_443725.3  CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 13
See identical proteins and their annotated locations for NP_443725.3
Status: REVIEWED
- Description
- Transcript Variant: This variant (17) encodes the longest isoform (13).
- Source sequence(s)
-
AC010542, AY174119, BC057852, DN992496
- Consensus CDS
-
CCDS10812.2
- UniProtKB/TrEMBL
-
E9PIL3
- Related
- ENSP00000368814.2, ENST00000379500.7
- Conserved Domains (1) summary
-
- cl04571
Location:131 → 216
- MARVEL; Membrane-associating domain
-
NM_181268.3 → NP_851785.2  CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 14
Status: REVIEWED
- Description
- Transcript Variant: This variant (18) lacks an exon segment, compared to variant 17, which results in a translational frameshift in the last coding exon. The encoded isoform (14) is shorter and contains a distinct C-terminus, compared to the protein (isoform 13) encoded by variant 17.
- Source sequence(s)
-
AC010542, AY174119, BC057852, DN992496
- Consensus CDS
-
CCDS45504.1
- UniProtKB/TrEMBL
-
E9PAX0
- Related
- ENSP00000330061.6, ENST00000328020.10
- Conserved Domains (1) summary
-
- cl04571
Location:131 → 216
- MARVEL; Membrane-associating domain
-
NM_181269.3 → NP_851786.1  CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 1
See identical proteins and their annotated locations for NP_851786.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) lacks an alternate in-frame segment of the first coding exon, compared to variant 17. The encoded isoform (1) is shorter than the protein (isoform 13) encoded by variant 17.
- Source sequence(s)
-
AY174118, DN992496
- Consensus CDS
-
CCDS45503.1
- UniProtKB/Swiss-Prot
- Q2PPY5, Q6PEV5, Q8IU76, Q8IU83, Q8IU86, Q8IU93, Q8IZ87, Q8IZ88, Q8IZ89, Q8IZ90, Q8IZ91, Q8IZ92, Q8IZ93, Q8IZ94, Q8IZ95, Q8IZ96, Q96JC2, Q96JC3
- Related
- ENSP00000405729.2, ENST00000457188.6
- Conserved Domains (1) summary
-
- cl14876
Location:2 → 98
- Zinc_peptidase_like; Zinc peptidases M18, M20, M28, and M42
-
NM_181270.3 → NP_851787.1  CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 2
See identical proteins and their annotated locations for NP_851787.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) has multiple differences in the coding region, compared to variant 17, one of which results in a translational frameshift in the last coding exon. The encoded isoform (2) is shorter and contains a distinct C-terminus, compared to the protein (isoform 13) encoded by variant 17.
- Source sequence(s)
-
AY174119, DN992496
- Consensus CDS
-
CCDS54019.1
- UniProtKB/Swiss-Prot
-
Q8IZ96
- Related
- ENSP00000432398.1, ENST00000528324.5
- Conserved Domains (1) summary
-
- cl14876
Location:2 → 98
- Zinc_peptidase_like; Zinc peptidases M18, M20, M28, and M42
-
NM_181271.3 → NP_851788.1  CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 3
See identical proteins and their annotated locations for NP_851788.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) has multiple differences in the coding region but maintains the reading frame, compared to variant 17. The encoded isoform (3) is shorter than the protein (isoform 13) encoded by variant 17.
- Source sequence(s)
-
AY174120, DN992496
- Consensus CDS
-
CCDS10810.1
- UniProtKB/Swiss-Prot
-
Q8IZ96
- Related
- ENSP00000331428.7, ENST00000332695.11
-
NM_181272.3 → NP_851789.1  CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 4
See identical proteins and their annotated locations for NP_851789.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) has multiple differences in the 5' coding region, compared to variant 17. The encoded isoform (4) is shorter than the protein (isoform 13) encoded by variant 17.
- Source sequence(s)
-
AY174121, DN992496
- Consensus CDS
-
CCDS10811.1
- UniProtKB/Swiss-Prot
-
Q8IZ96
- Related
- ENSP00000337119.6, ENST00000336328.10
-
NM_181283.3 → NP_851800.1  CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 5
See identical proteins and their annotated locations for NP_851800.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) has multiple differences in the coding region, compared to variant 17, one of which results in a translational frameshift in the last coding exon. The encoded isoform (5) is shorter and contains a distinct C-terminus, compared to the protein (isoform 13) encoded by variant 17.
- Source sequence(s)
-
AY174122, DN992496
- Consensus CDS
-
CCDS54020.1
- UniProtKB/Swiss-Prot
-
Q8IZ96
- Related
- ENSP00000432687.1, ENST00000531885.5
-
NM_181296.3 → NP_851813.1  CKLF-like MARVEL transmembrane domain-containing protein 1 isoform 12
See identical proteins and their annotated locations for NP_851813.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (16) has multiple differences in the coding region, compared to variant 17, one of which results in a translational frameshift in the last coding exon. The encoded isoform (12) is shorter and contains a distinct C-terminus, compared to the protein (isoform 13) encoded by variant 17.
- Source sequence(s)
-
AY174133, DN992496
- Consensus CDS
-
CCDS54021.1
- UniProtKB/Swiss-Prot
-
Q8IZ96
- Related
- ENSP00000435020.1, ENST00000533666.5
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000016.10Â Reference GRCh38.p14 Primary Assembly
- Range
-
66566439..66579135
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060940.1Â Alternate T2T-CHM13v2.0
- Range
-
72360734..72373430
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_181285.1: Suppressed sequence
- Description
- NM_181285.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
-
NM_181286.1: Suppressed sequence
- Description
- NM_181286.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
-
NM_181287.1: Suppressed sequence
- Description
- NM_181287.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
-
NM_181288.1: Suppressed sequence
- Description
- NM_181288.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
-
NM_181289.2: Suppressed sequence
- Description
- NM_181289.2: This RefSeq was temporarily suppressed because currently there is not sufficient data to support this transcript.
-
NM_181290.1: Suppressed sequence
- Description
- NM_181290.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
-
NM_181292.1: Suppressed sequence
- Description
- NM_181292.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
-
NM_181293.1: Suppressed sequence
- Description
- NM_181293.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
-
NM_181294.1: Suppressed sequence
- Description
- NM_181294.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
-
NM_181295.1: Suppressed sequence
- Description
- NM_181295.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
-
NM_181297.1: Suppressed sequence
- Description
- NM_181297.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
-
NM_181298.1: Suppressed sequence
- Description
- NM_181298.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
-
NM_181299.1: Suppressed sequence
- Description
- NM_181299.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
-
NM_181300.1: Suppressed sequence
- Description
- NM_181300.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
-
NM_181301.1: Suppressed sequence
- Description
- NM_181301.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.