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    LOC108663169 histidine-containing phosphotransfer protein 2-like [ Theobroma cacao (cacao) ]

    Gene ID: 108663169, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC108663169
    Gene description
    histidine-containing phosphotransfer protein 2-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Theobroma cacao
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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    Genomic context

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    See LOC108663169 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current Criollo_cocoa_genome_V2 (GCF_000208745.1) 9 NC_030858.1 (34433640..34439912)

    Chromosome 9 - NC_030858.1Genomic Context describing neighboring genes Neighboring gene subtilisin-like protease SBT4.15 Neighboring gene subtilisin-like protease SBT4.15 Neighboring gene UPF0481 protein At3g47200 Neighboring gene flagellar radial spoke protein 5 Neighboring gene pentatricopeptide repeat-containing protein At4g21065

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_030858.1 Chromosome 9 Reference Criollo_cocoa_genome_V2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histidine phosphotransfer kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein histidine kinase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytokinin-activated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in phosphorelay signal transduction system IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    histidine-containing phosphotransfer protein 1-like; histidine-containing phosphotransfer protein 2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Theobroma cacao Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Criollo_cocoa_genome_V2 Primary Assembly

    Genomic

    1. NC_030858.1 Reference Criollo_cocoa_genome_V2 Primary Assembly

      Range
      34433640..34439912
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018126551.1 → XP_017982040.1  histidine-containing phosphotransfer protein 1-like isoform X3

    2. XM_018126554.1 → XP_017982043.1  histidine-containing phosphotransfer protein 1-like isoform X5

    3. XM_018126549.1 → XP_017982038.1  histidine-containing phosphotransfer protein 2-like isoform X1

    4. XM_018126553.1 → XP_017982042.1  histidine-containing phosphotransfer protein 2-like isoform X4

    5. XM_018126550.1 → XP_017982039.1  histidine-containing phosphotransfer protein 2-like isoform X2

    6. XM_018126555.1 → XP_017982044.1  histidine-containing phosphotransfer protein 2-like isoform X6

    7. XM_018126556.1 → XP_017982045.1  histidine-containing phosphotransfer protein 2-like isoform X7

    Nucleotide Protein
    Heading Accession and Version

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