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    LOC107893180 GDSL esterase/lipase At5g18430-like [ Gossypium hirsutum (cotton) ]

    Gene ID: 107893180, updated on 12-Aug-2024

    Summary

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    Gene symbol
    LOC107893180
    Gene description
    GDSL esterase/lipase At5g18430-like
    Locus tag
    ERO13_A13G162200v2
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gossypium hirsutum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
    Also known as
    lipase
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    Genomic context

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    See LOC107893180 in Genome Data Viewer
    Location:
    chromosome: A13
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) A13 NC_053436.1 (103170269..103172202, complement)

    Chromosome A13 - NC_053436.1Genomic Context describing neighboring genes Neighboring gene probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC Neighboring gene uncharacterized LOC107893179 Neighboring gene uncharacterized LOC107893181 Neighboring gene secreted RxLR effector protein 161-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_053436.1 Chromosome A13 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hydrolase activity, acting on ester bonds IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GDSL esterase/lipase At5g18430-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001326805.1 → NP_001313734.1  GDSL esterase/lipase At5g18430-like precursor

      Status: PROVISIONAL

      Source sequence(s)
      EU273289
      UniProtKB/TrEMBL
      A9QVW1
      Conserved Domains (1) summary
      cd01837
      Location:29 → 346
      SGNH_plant_lipase_like; a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its ...

    RefSeqs of Annotated Genomes: GCF_007990345.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Genomic

    1. NC_053436.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

      Range
      103170269..103172202 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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