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    LOC107331116 GFP-like fluorescent chromoprotein amFP486 [ Acropora digitifera ]

    Gene ID: 107331116, updated on 2-Nov-2023

    Summary

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    Gene symbol
    LOC107331116
    Gene description
    GFP-like fluorescent chromoprotein amFP486
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Acropora digitifera
    Lineage
    Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Acroporidae; Acropora
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    Genomic context

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    See LOC107331116 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    100 current Adig_1.1 (GCF_000222465.1) Unplaced Scaffold NW_015441082.1 (474353..491984, complement)

    NW_015441082.1Genomic Context describing neighboring genes Neighboring gene GFP-like fluorescent chromoprotein amFP486 Neighboring gene GFP-like fluorescent chromoprotein amFP486 Neighboring gene GFP-like fluorescent chromoprotein amFP486 Neighboring gene GFP-like fluorescent chromoprotein amFP486 Neighboring gene GFP-like fluorescent chromoprotein amFP486 Neighboring gene von Willebrand factor A domain-containing protein 3B-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015441082.1 Unplaced Scaffold Reference Adig_1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in bioluminescence IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in generation of precursor metabolites and energy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GFP-like fluorescent chromoprotein amFP486

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Acropora digitifera Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Adig_1.1 Primary Assembly

    Genomic

    1. NW_015441082.1 Reference Adig_1.1 Primary Assembly

      Range
      474353..491984 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015895652.1 → XP_015751138.1  GFP-like fluorescent chromoprotein amFP486 isoform X2

      UniProtKB/TrEMBL
      A0A1S7IWU8
      Conserved Domains (1) summary
      pfam01353
      Location:12 → 205
      GFP; Green fluorescent protein

    2. XM_015895651.1 → XP_015751137.1  GFP-like fluorescent chromoprotein amFP486 isoform X1

      UniProtKB/TrEMBL
      A0A1S7IWU8, I1DSK2
      Conserved Domains (1) summary
      pfam01353
      Location:12 → 205
      GFP; Green fluorescent protein

    3. XM_015895654.1 → XP_015751140.1  GFP-like fluorescent chromoprotein amFP486 isoform X4

      UniProtKB/TrEMBL
      I1DSK3
      Conserved Domains (1) summary
      pfam01353
      Location:11 → 208
      GFP; Green fluorescent protein

    4. XM_015895653.1 → XP_015751139.1  GFP-like fluorescent chromoprotein amFP486 isoform X3

      UniProtKB/TrEMBL
      I1DSK3
      Conserved Domains (1) summary
      pfam01353
      Location:11 → 223
      GFP; Green fluorescent protein
    Nucleotide Protein
    Heading Accession and Version

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