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    ehd4 EH-domain containing 4 [ Esox lucius (northern pike) ]

    Gene ID: 105023592, updated on 18-Jun-2024

    Summary

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    Gene symbol
    ehd4
    Gene description
    EH-domain containing 4
    See related
    Ensembl:ENSELUG00000004390
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Esox lucius
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
    Orthologs
    zebrafish all
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    Genomic context

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    See ehd4 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    104 current fEsoLuc1.pri (GCF_011004845.1) 15 NC_047583.1 (25332843..25345858, complement)
    103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG15 NC_025982.4 (25560382..25573377, complement)

    Chromosome 15 - NC_047583.1Genomic Context describing neighboring genes Neighboring gene forkhead box G1a Neighboring gene spectrin, beta, non-erythrocytic 5 Neighboring gene TNF receptor-associated factor 3 Neighboring gene REST corepressor 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endosomal transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    EH domain-containing protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fEsoLuc1.pri Primary Assembly

    Genomic

    1. NC_047583.1 Reference fEsoLuc1.pri Primary Assembly

      Range
      25332843..25345858 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010892922.5 → XP_010891224.1  EH domain-containing protein 4

      UniProtKB/TrEMBL
      A0A3P8ZGL5
      Related
      ENSELUP00000027969.1, ENSELUT00000014579.3
      Conserved Domains (4) summary
      smart00027
      Location:439 → 529
      EH; Eps15 homology domain
      cd09913
      Location:61 → 301
      EHD; Eps15 homology domain (EHD), C-terminal domain
      cd00052
      Location:449 → 514
      EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
      pfam16880
      Location:25 → 57
      EHD_N; N-terminal EH-domain containing protein
    Nucleotide Protein
    Heading Accession and Version

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