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    LOC105012605 ras-related protein Rab-25 [ Esox lucius (northern pike) ]

    Gene ID: 105012605, updated on 18-Jun-2024

    Summary

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    Gene symbol
    LOC105012605
    Gene description
    ras-related protein Rab-25
    See related
    Ensembl:ENSELUG00000006604
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Esox lucius
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
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    Genomic context

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    See LOC105012605 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    104 current fEsoLuc1.pri (GCF_011004845.1) 10 NC_047578.1 (12607257..12609989, complement)
    103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG10 NC_025977.4 (12689721..12693120, complement)

    Chromosome 10 - NC_047578.1Genomic Context describing neighboring genes Neighboring gene shugoshin 1 Neighboring gene zinc finger protein 385D Neighboring gene ubiquilin-4 Neighboring gene lens fiber membrane intrinsic protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome and linkage map of the northern pike (Esox lucius): conserved synteny revealed between the salmonid sister group and the Neoteleostei. Rondeau EB, et al. PLoS One, 2014. PMID 25069045, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in recycling endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras-related protein Rab-25

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fEsoLuc1.pri Primary Assembly

    Genomic

    1. NC_047578.1 Reference fEsoLuc1.pri Primary Assembly

      Range
      12607257..12609989 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013135532.4 → XP_012990986.2  ras-related protein Rab-25 isoform X2

      Conserved Domains (1) summary
      cd01868
      Location:8 → 168
      Rab11_like; Rab GTPase family 11 (Rab11)-like includes Rab11a, Rab11b, and Rab25

    2. XM_013135531.4 → XP_012990985.2  ras-related protein Rab-25 isoform X1

      Related
      ENSELUP00000005612.3, ENSELUT00000010371.3
      Conserved Domains (1) summary
      cd01868
      Location:8 → 169
      Rab11_like; Rab GTPase family 11 (Rab11)-like includes Rab11a, Rab11b, and Rab25

    3. XM_013135533.4 → XP_012990987.4  ras-related protein Rab-25 isoform X3

      UniProtKB/TrEMBL
      A0A3P8XM41
      Conserved Domains (1) summary
      cd01868
      Location:8 → 171
      Rab11_like; Rab GTPase family 11 (Rab11)-like includes Rab11a, Rab11b, and Rab25
    Nucleotide Protein
    Heading Accession and Version

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