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    sar1aa secretion associated, Ras related GTPase 1Aa [ Esox lucius (northern pike) ]

    Gene ID: 105009029, updated on 18-Jun-2024

    Summary

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    Gene symbol
    sar1aa
    Gene description
    secretion associated, Ras related GTPase 1Aa
    See related
    Ensembl:ENSELUG00000028561
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Esox lucius
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
    Also known as
    SAR1B; sar1a
    Orthologs
    zebrafish all
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    Genomic context

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    See sar1aa in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    104 current fEsoLuc1.pri (GCF_011004845.1) 6 NC_047574.1 (4418026..4420777, complement)
    103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG06 NC_025973.4 (4458710..4461482, complement)

    Chromosome 6 - NC_047574.1Genomic Context describing neighboring genes Neighboring gene activating signal cointegrator 1 complex subunit 1 Neighboring gene SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 Neighboring gene inorganic pyrophosphatase 1a Neighboring gene leucine rich repeat containing 20

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in membrane organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of protein exit from endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of COPII vesicle coating IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of COPII vesicle coat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum exit site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GTP-binding protein SAR1a
    Names
    GTP-binding protein SAR1b
    secretion associated Ras related GTPase 1A
    NP_001297893.1
    XP_010866736.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001310964.1 → NP_001297893.1  GTP-binding protein SAR1a

      See identical proteins and their annotated locations for NP_001297893.1

      Status: PROVISIONAL

      Source sequence(s)
      BT079407
      UniProtKB/TrEMBL
      A0A6Q2XFE1, C1BXS8
      Related
      ENSELUP00000051870.1, ENSELUT00000064152.2
      Conserved Domains (2) summary
      smart00178
      Location:5 → 197
      SAR; Sar1p-like members of the Ras-family of small GTPases
      cd00879
      Location:3 → 197
      Sar1; Sar1 is an essential component of COPII vesicle coats

    RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fEsoLuc1.pri Primary Assembly

    Genomic

    1. NC_047574.1 Reference fEsoLuc1.pri Primary Assembly

      Range
      4418026..4420777 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010868434.3 → XP_010866736.1  GTP-binding protein SAR1a isoform X1

      UniProtKB/TrEMBL
      A0A6Q2XFE1
      Conserved Domains (2) summary
      smart00178
      Location:5 → 175
      SAR; Sar1p-like members of the Ras-family of small GTPases
      cd00879
      Location:3 → 175
      Sar1; Sar1 is an essential component of COPII vesicle coats
    Nucleotide Protein
    Heading Accession and Version

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