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    DDX41 DEAD-box helicase 41 [ Ursus maritimus (polar bear) ]

    Gene ID: 103664437, updated on 11-Mar-2024

    Summary

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    Gene symbol
    DDX41
    Gene description
    DEAD-box helicase 41
    See related
    Ensembl:ENSUMAG00000024285
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ursus maritimus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
    Orthologs
    human mouse all
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    Genomic context

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    See DDX41 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    101 current ASM1731132v1 (GCF_017311325.1) Unplaced Scaffold NW_024423897.1 (95163..100494)
    100 previous assembly UrsMar_1.0 (GCF_000687225.1) Unplaced Scaffold NW_007907126.1 (94797..100151)

    NW_024423897.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 193 member B Neighboring gene docking protein 3 Neighboring gene PDZ and LIM domain 7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable ATP-dependent RNA helicase DDX41

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ursus maritimus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1731132v1 Primary Assembly

    Genomic

    1. NW_024423897.1 Reference ASM1731132v1 Primary Assembly

      Range
      95163..100494
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008692307.2 → XP_008690529.2  probable ATP-dependent RNA helicase DDX41 isoform X1

      UniProtKB/TrEMBL
      A0A384C7T0
      Conserved Domains (2) summary
      COG0513
      Location:181 → 594
      SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
      cd17951
      Location:220 → 425
      DEADc_DDX41; DEAD-box helicase domain of DEAD box protein 41

    2. XM_008692308.2 → XP_008690530.1  probable ATP-dependent RNA helicase DDX41 isoform X2

      See identical proteins and their annotated locations for XP_008690530.1

      UniProtKB/TrEMBL
      A0A384C818
      Related
      ENSUMAP00000033708.1
      Conserved Domains (2) summary
      COG0513
      Location:153 → 566
      SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
      cd17951
      Location:192 → 397
      DEADc_DDX41; DEAD-box helicase domain of DEAD box protein 41
    Nucleotide Protein
    Heading Accession and Version

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